Gene Information

Name : Sfla_5929 (Sfla_5929)
Accession : YP_004926832.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6799544 - 6800389 bp
Length : 846 bp
Strand : +
Note : KEGG: sgr:SGR_6642 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACCCCCGAGACGCACCGGAAAGGAACGCCCGGCGACGGCCTGCGGGCCACCCGGATCACCCGGGAGGCGGGCGGGCG
GATCGTCCTCGACGGGGTGAGTGTCGCGCCGCCGTCCGGCGCCACGGTCGGGCTCCTCGGACCCAACGGCTCCGGCAAGA
CCACGCTGTTGCGTGTGATGGCCGGCGTACTCGGCCCCGGCGCGGGAGTGGTGACCCTGGACGGACGCACGCTCGCCGAG
ACCGGACGACGGGCCGTGGCCCGACGCGTGGCCGTCGTCGACCAGCACGCGGACACCCAGATCGACCTGAGCGTCCTGGA
CGTCGTACGGCTCGGCCGAATCCCGCACCGGCGCCCCTGGTCGGCGTCCGGCCCGGAGGACGAGGCCGCCGTTCAAGGGG
CCTTGGCCCGCACCGGACTGGCCGACCGCGCCGCGCAGTCCTGGCACACCCTGTCCGGAGGCGAGCGCCAGCGGGTGCAG
ATCGCCCGTGCCCTGGCCCAGCAGCCGCGGGAACTCCTGCTGGACGAACCCACCAACCACCTCGACATCCAGCACCAGTT
GGAGCTGCTCTCCCTGATCGCCGCGCTGCCCGTGACCGCGGTGGTCGCGCTGCACGACCTCAACCTGGCCGCGATGTTCT
GCGACCGGGTCGTCGTCATGAAGGAGGGCCGGGTGGTGGCGGGCGGAACGCCCTCGGAGGTGATCACGGAGGAACTCGTC
GCCGAGGTCTACCGGGTACGCGCGGTGGTCACACCGGACGGACCGGACGGGCGCCCTTCGGTGCGCTTCCTGCCCGGAGG
GGCGGTGCACGCGCGGTACGGGCACGACGAGAGGGCGGGCCCGTGA

Protein sequence : 
MTPETHRKGTPGDGLRATRITREAGGRIVLDGVSVAPPSGATVGLLGPNGSGKTTLLRVMAGVLGPGAGVVTLDGRTLAE
TGRRAVARRVAVVDQHADTQIDLSVLDVVRLGRIPHRRPWSASGPEDEAAVQGALARTGLADRAAQSWHTLSGGERQRVQ
IARALAQQPRELLLDEPTNHLDIQHQLELLSLIAALPVTAVVALHDLNLAAMFCDRVVVMKEGRVVAGGTPSEVITEELV
AEVYRVRAVVTPDGPDGRPSVRFLPGGAVHARYGHDERAGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-38 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-28 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-28 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-28 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-28 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-33 41
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5929 YP_004926832.1 ABC transporter BAC0164 Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5929 YP_004926832.1 ABC transporter VFG1042 Protein 1e-33 41