Gene Information

Name : Sfla_5394 (Sfla_5394)
Accession : YP_004926308.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 6185750 - 6186586 bp
Length : 837 bp
Strand : -
Note : KEGG: sgr:SGR_2992 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCCGTCTCCGGATGACCTGCGGACCGGTGCCGCGGACGGCGTCCGGGAGGCCGCGACGGCGGCGGTCACGCCCGCCGT
CTCCGTGCGCGGGGTGACACACCGCTACGGGCGCGGCGCGGACGCCGTGACGGCGCTCGGCCCGCTGTCGCTCGACGTCC
CGGCCGGCGAGTTCCTGGTGCTCGTGGGCCCCTCGGGGAGCGGGAAGAGCACACTGCTGAGGCTGATCGCCGGCTTCGAG
CACGCCACGTCGGGCGACGTCACCGTGCACGGCGGGACGCCCGAACCGGGACGCCAGGCGGGCGTCGTCTTCCAGCAGCC
GCGGCTGTTCCCCTGGCGCACGGTCGGGGAGAACATCGCGCTGGCGCTGCGGTACGCGGGAGTCCCCCGGGCCGAACGCC
CCGCGCGCGTCGAGGACCTGCTGGAGCGGGTCGGACTGGCCGGCACCGCGGGCCGCAGGACCTGGCAGATCTCCGGCGGC
CAGCAGCAGCGGGTGGCCATCGCCCGGGCCCTGGCCGGCGGCAAGGACCTGCTGCTGCTGGACGAGCCGTTCGCGGCCCT
GGACGCGCTCACCCGGGAGCGGCTCCAGGAGGACCTGCGCACGGTCAGCGCGCGTACGGGGATCACCTCGGTCCTCGTCA
CGCACAGCGTGGACGAGGCCGTCTTCCTGGGCACCCGCGCGGTCGTCCTGAGCGCCGGTCCCGGCACGGTCGCCCTGGAC
GTGCGCATCTCCCTGCCCCGGACGGGGAACGACGACCCGGACGGGCTGCGAGGACTGCCCGAGTACGCCGCCCTGCGCGC
CGAGATCGGCGCGGCCGTACGCGACGCGGCCCGCTGA

Protein sequence :
MPSPDDLRTGAADGVREAATAAVTPAVSVRGVTHRYGRGADAVTALGPLSLDVPAGEFLVLVGPSGSGKSTLLRLIAGFE
HATSGDVTVHGGTPEPGRQAGVVFQQPRLFPWRTVGENIALALRYAGVPRAERPARVEDLLERVGLAGTAGRRTWQISGG
QQQRVAIARALAGGKDLLLLDEPFAALDALTRERLQEDLRTVSARTGITSVLVTHSVDEAVFLGTRAVVLSAGPGTVALD
VRISLPRTGNDDPDGLRGLPEYAALRAEIGAAVRDAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-33 45
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-23 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-22 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5394 YP_004926308.1 ABC transporter NC_008702.1.4606598. Protein 1e-15 41