Gene Information

Name : Sfla_5031 (Sfla_5031)
Accession : YP_004925949.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5790599 - 5791402 bp
Length : 804 bp
Strand : +
Note : KEGG: sgr:SGR_5710 iron-siderophore uptake ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCAGCGCCTCACCGCGGACTCGGTGACCCTCGGCTACGACCAGCGGGTCATCGCCGAGAACCTCTCGGTGGAGATCCC
CGACAACTCCTTCACGGTCGTCGTCGGCCCCAACGCCTGCGGCAAGTCGACCCTGCTGCGCGCCCTCTCCCGGATGCTGA
AGCCGACCGCCGGAGACGTCCTGCTGGACGGGCGGTCCATCCACCGGATGCCCGCGAAGCAGGTCGCCAGGACCCTGGGC
CTGCTGCCGCAGTCCTCCGTGGCCCCGGACGGCATCACCGTCGCCGACCTCGTCTCGCGCGGCCGCTACCCGCACCAGGG
GCTGCTGCGCCAGTGGTCGCCCGAGGACGAGCGGATCGTGAAGGAGTCCATGGAGTCGACCGGCGTCGGCGGGCTCGCCG
ACCGCTACGTCGACGAACTGTCGGGCGGCCAGCGCCAGCGCGTCTGGATCGCCATGGCCCTCGCCCAGCAGACACCGCTC
CTGCTGCTGGACGAGCCGACGACGTACCTCGACATCCAGCACCAGATCGACGTGCTCGACCTCTGCGCCGAACTGCACGA
GACACAGGGCCGCACGCTGGTCGCGGTGCTCCACGACCTCAATCACGCCGCCCGGTACGCCACCCATCTGATCGCCATGC
GCGGGGGCGCGGTCATCGCCGAGGGCGCTCCCGGCGACATCGTCACCGCGCGGCTCGTGGAGGAGGTGTTCGGGATACGG
TGCCAGGTCATCGACGACCCCGAGACGGGAACGCCCCTCGTCGTCCCCGCCGCCCGCGGGAAGCGCGCCGGTGCGTCCGT
CTGA

Protein sequence : 
MQRLTADSVTLGYDQRVIAENLSVEIPDNSFTVVVGPNACGKSTLLRALSRMLKPTAGDVLLDGRSIHRMPAKQVARTLG
LLPQSSVAPDGITVADLVSRGRYPHQGLLRQWSPEDERIVKESMESTGVGGLADRYVDELSGGQRQRVWIAMALAQQTPL
LLLDEPTTYLDIQHQIDVLDLCAELHETQGRTLVAVLHDLNHAARYATHLIAMRGGAVIAEGAPGDIVTARLVEEVFGIR
CQVIDDPETGTPLVVPAARGKRAGASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-63 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-66 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-66 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-66 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-66 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-63 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-63 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-53 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-52 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-52 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-52 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5031 YP_004925949.1 ABC transporter BAC0164 Protein 7e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5031 YP_004925949.1 ABC transporter VFG0925 Protein 2e-77 58
Sfla_5031 YP_004925949.1 ABC transporter VFG1042 Protein 7e-52 46