Gene Information

Name : Sfla_5029 (Sfla_5029)
Accession : YP_004925947.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 5788471 - 5789487 bp
Length : 1017 bp
Strand : +
Note : PFAM: transport system permease; KEGG: sco:SCO1787 iron-siderophore uptake system transmembrane component

DNA sequence :
ATGCCGGGCACGGGCGCGCGCGCCGGGCGTCACGCGGCCAGAGCGGCCGGTCTGCTGTTCGCCGTCGCGGTGCTGGTGCT
GGTGTGCCTCGCGAGTGTCGCGATCGGCGCCAAGGCCCTTCCCCTCTCCGAGGTGTGGCACGGCCTGTTCCACTACTCGG
GCACCAACGGTGACGTCCTCGTACGCGATGTGCGGGTCCCGCGCACCGTGCTGGGGCTGATCGTCGGGGCAGCGCTCGGG
CTGGCCGGCGCGGTGATGCAGGCGCTCACCCGCAATCCGCTCGCCGAGCCCGGTCTGCTGGGCGTCAACGCGGGCGCGGC
GGCGGCGGTCGTCTCCGCCATCACCTTCTTCGGCGTCACGTCGCTGACCGGATACGTCTGGTTCGCGTTCGGCGGCGCCG
CGCTCGTGTCCGTCGCGGTGTACCTGCTGGGCGGCAGCAGGTCCGCGAACCCCGTGCGTCTCGCGCTCGCCGGTACGGCG
GTCACCGCGGCCCTGTTCGGTTACGTCAACGCCGTCCAGCTGCTGGACTCCGCGGCGCTGGACCGGCTGCGGTTCTGGAC
CGTCGGTTCGCTCGCCTCGGCGAACCCGGAGACCGTCGGCAAGGTGTGGCCGTTCATCGCGCTCGGTGTGCTGCTGTCCC
TGCTCATCGCCCGGCCGCTCAACGCGCTGGAGATGGGCGACGACACGGCCAGGGCGCTCGGCGCCCACCTGACCCGCACC
CGTGTCCTCGCGATGGCGGCCGTCACCCTGCTCTGCGGGGCGGCGACCGCCGCGTGCGGGCCGATCGTCTTCATCGGGCT
GATGATCCCGCACCTGGTCCGGACGATCACGGGCCCGGACATGCGGTGGATCCTGCCCTACGCCGCCGTTCTCGCGCCCG
TGCTGCTGCTCGTCGCCGACGTGGTGGGCAGGGTCGCCGCCCGCCCCTCCGAGCTGCAGGTCGGCATCGTCACCGCACTG
CTGGGCGGGCCCGTGTTCATCCATCTCGTACGCCGCAAGAGGATGGCCCAGCTGTGA

Protein sequence :
MPGTGARAGRHAARAAGLLFAVAVLVLVCLASVAIGAKALPLSEVWHGLFHYSGTNGDVLVRDVRVPRTVLGLIVGAALG
LAGAVMQALTRNPLAEPGLLGVNAGAAAAVVSAITFFGVTSLTGYVWFAFGGAALVSVAVYLLGGSRSANPVRLALAGTA
VTAALFGYVNAVQLLDSAALDRLRFWTVGSLASANPETVGKVWPFIALGVLLSLLIARPLNALEMGDDTARALGAHLTRT
RVLAMAAVTLLCGAATAACGPIVFIGLMIPHLVRTITGPDMRWILPYAAVLAPVLLLVADVVGRVAARPSELQVGIVTAL
LGGPVFIHLVRRKRMAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-20 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-20 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-20 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_5029 YP_004925947.1 transport system permease VFG0926 Protein 3e-30 49