Gene Information

Name : Sfla_3413 (Sfla_3413)
Accession : YP_004924351.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 3937323 - 3938555 bp
Length : 1233 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: scb:SCAB_60181 transposase

DNA sequence :
ATGTTCGAGATCCGCAAGGACCGGGCCAAGGCTCTGGGCGGCCGCAGGCGACTGGTCCGCGAGCGGGAGGAATACTTCCT
GCTCGTGGACCAGGGTTACGGAAACACCGAGGCCTGCCGACTGGTGGGCATCAACGAACGAACCGGTCGTGAATGGCGCA
ACGGCAGGACGGCAAAGGACCGGTTCCGCGCACCGGCTCGTCCGGCGTCGGCTCCCGTTGTCCCGAGCCGTTTCCTGACC
CAGGCTGATCGCCTGCACGTCGCCGATCGTTTGCGTGAGAAGGCAACGGTCCGGGCCATTGCCGCTGAGCTGGGCCGCAG
CCCGTCCACCATCAGTCGTGAGATACGACGCAACGGCATCCCACTACGTGGAGACACCTCGCGCTGGGCCTATCGGCCCT
ACGCGGCTCAAGCTCGTTCCGATGCACGCCGGCCACGGCCGAAGCCGGGAAGGATCGGCCAGAATTCCCGGCTACGGGAC
TACATTCAGGAGCGTCTGACTCGCCGCTGGAGCCCGGAGCAGATCGCCGCCCAGTTGCCTCGCGACTTCCCCGACGACCT
GGAGATGCGTGTGACACACGAGACGATCTACCAGGCGCTATACGTCCAGGGCCGCGGCGAGCTCCGCAGAGAACTCGTTC
ACGCGTTGCGCACGGGCCGAACCCGTCGCAAGCCTCACCGGCACGCAGCCAGGCGTCAGCCGCGCTTCGCGACGCCGATG
GTGATGATCAGCGAACGACCAGCAGAGGTCGCTGACCGGGCCATTCCAGGGCACTGGGAGGGCGATCTCATCGTCGGACC
TGGCCACCGGTCCGCCATCGGGACACTGGTGGAACGCTCGACGCGCTACCTGATGCTCCTGCACCTGCCCAACGGCGCAC
ACAAGGCCGAACACTTCCACCAAGTGCTTGCCCGCACGATTCAGACGCTGCCATCACAGTTCAAACGCTCTCTGACCTGG
GACCAAGGCACGGAAATGGCCGGCCACGGCGCGTTCACCATGGCCACCGACATGCCTGTCTACTTCTGCGACCCGGCCAG
CCCATGGCAGCGCGGCTCCAACGAGAACACCAACGGCCTGCTACGGCAGTACTTCCCGAAGGGAAGCGATCTCTCCAGCC
ACAGCCTCGAACACCTCGCTGCCGTGGCTGCCGAACTCAATGGCCGCCCACGAAAAACGCTCGGCTGGGAGACCCCAGCC
GAGCGTCTGGCTAAGCTCCTGGCAGCAAGCTGA

Protein sequence :
MFEIRKDRAKALGGRRRLVREREEYFLLVDQGYGNTEACRLVGINERTGREWRNGRTAKDRFRAPARPASAPVVPSRFLT
QADRLHVADRLREKATVRAIAAELGRSPSTISREIRRNGIPLRGDTSRWAYRPYAAQARSDARRPRPKPGRIGQNSRLRD
YIQERLTRRWSPEQIAAQLPRDFPDDLEMRVTHETIYQALYVQGRGELRRELVHALRTGRTRRKPHRHAARRQPRFATPM
VMISERPAEVADRAIPGHWEGDLIVGPGHRSAIGTLVERSTRYLMLLHLPNGAHKAEHFHQVLARTIQTLPSQFKRSLTW
DQGTEMAGHGAFTMATDMPVYFCDPASPWQRGSNENTNGLLRQYFPKGSDLSSHSLEHLAAVAAELNGRPRKTLGWETPA
ERLAKLLAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 2e-67 48
DIP0764 NP_939135.1 transposase Not tested Not named Protein 5e-68 48
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 1e-67 48
unnamed CAC39292.1 - Not tested LPA Protein 2e-57 43