Gene Information

Name : Sfla_0313 (Sfla_0313)
Accession : YP_004921297.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 363612 - 364745 bp
Length : 1134 bp
Strand : -
Note : PFAM: transport system permease; KEGG: sco:SCO0497 iron-siderophore permease transmembrane protein

DNA sequence :
GTGCTCCCCGACAGGAGCCGGATTCCCCAACTGCCCCTGAAGCACCAGATGATCAAAGGGATATCGTACGTCGACATGAG
CACGAGCGCAGTGGAGCGCCCCGTCCTCAGGGGCGCGGCAGAAGCCCGTCGAAGGCGGGCGGTGGGCCTGGGCGCGCTGG
TGGCGGTCCTGGTGGCCGGAGTGGTCGCGTCCCTGGCCGTCGGCGCGCGCGCGTTGAGTCCTGCCGAGGTCTGGCACGGG
CTGTTCGCCGCGCCGGACTCCGATCAGCGGCTCACCGAGATCAGGCTCATCGTGCAGACGGTGCGGGTGCCCCGGACGGT
GCTCGCGGTCGTCGCGGGTATCGCCCTGGGTGTCGGCGGGGCGCTGATCCAGGGCTACACACGGAACCCGATCGCGGACA
CCGGCCTGCTGGGCGTGAACTCCGGTGCCTCCTTCGCCGTCGTGACGGTCATCGCCGTGTTCGGCCTCACCTCCCCGTTC
CAGTACGTCTGGTTCGCGTTCCTGGGGGCCGGGGCCGCCGGCGTCGTCGTGTTCGGGCTGTCCAGCATCGGGCGGGGCGC
CGGCAACCCGCTGACGCTCGCTCTGGCCGGTCAGGGGGTCACGGTGTTCCTCGCGGCGATGACCATGGCGATCGCGCTGT
CGGACCTGAAGGCGCTGGACGCGCTTCGCTTCTGGAACGCCGGTTCGGTGGCCGGAGTCGGCTTCGACGTCATCGGGCCG
GTCGGCGCGTTCATCGCGGTCGGGGTACTGCTCGCGCTGACCACCCTGCCGTCGCTCAACCTGCTCAACCTGGGGGACGA
CGTGGCGCGCGGGCTGGGTGTCAACATCGCCCTGAGCCGCACCGTGGGCATCGTCGCCATCACGCTGCTGGCCGGCGCGG
CGACCGCCGCATGCGGCCCCATCGCGTTCCTCGGGCTGATGGTCGCCCATGTGGCCCGCTATCTGACCGGGCCGGACTAC
CGCTGGCTGGTGCCGTACGCGGGTCTCCTCGGAGCCGTCGTGCTGCTGGTCTGCGACATCGTGGGGCGTCTCGTGGTGCG
GCCGGGCGAGCTGGACGCGGGTGTGGTCGTCGCCCTGCTCGGCGCCCCGTTCTTCGCGGCGCTCGTCTGGCGAGGAAAGT
TCAGGAGCGCATGA

Protein sequence :
MLPDRSRIPQLPLKHQMIKGISYVDMSTSAVERPVLRGAAEARRRRAVGLGALVAVLVAGVVASLAVGARALSPAEVWHG
LFAAPDSDQRLTEIRLIVQTVRVPRTVLAVVAGIALGVGGALIQGYTRNPIADTGLLGVNSGASFAVVTVIAVFGLTSPF
QYVWFAFLGAGAAGVVVFGLSSIGRGAGNPLTLALAGQGVTVFLAAMTMAIALSDLKALDALRFWNAGSVAGVGFDVIGP
VGAFIAVGVLLALTTLPSLNLLNLGDDVARGLGVNIALSRTVGIVAITLLAGAATAACGPIAFLGLMVAHVARYLTGPDY
RWLVPYAGLLGAVVLLVCDIVGRLVVRPGELDAGVVVALLGAPFFAALVWRGKFRSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 7e-18 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 7e-18 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 7e-18 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 7e-18 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_0313 YP_004921297.1 transport system permease VFG0926 Protein 6e-19 46