Gene Information

Name : Sfla_0311 (Sfla_0311)
Accession : YP_004921295.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : Fe+3-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 361659 - 362498 bp
Length : 840 bp
Strand : -
Note : KEGG: sgr:SGR_6713 ABC-type Fe3+-siderophore transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGGGCGCTCAGCACGGCACGACGAAGCATTCCGCGGCCTCGGACGAAGCGCGGCTCGCCGCCAGAGGTGTCACGGTCGG
ATACGGCGGACGGACCGTCATCGACGGGCTCGACGTGACGGTGCCGTCAGGGCTGATCACCACGATCATCGGCCCCAACG
GCTGTGGCAAGTCCACCCTGTTGCGCACCCTGACGCGGCTGCTCAAGCCCGCCTCGGGAGCGGTCGTCCTGGACGGCGAG
GACATCGCCGGGCTCAGGACCAGGGACGTGGCGAAGAAGCTCGGCCTCCTGCCGCAGGCCCCGGTCGCGCCGGAGGGCCT
GACGGTGGCCGACCTGGTCGCACGCGGGCGCCACCCGCACCAGAGCTGGCTGCGGCAGTGGTCCTCGGACGACGCATCCG
TCGTGGAGCGGGCCCTGGCCATGACCGGGGTGTCCGAACTGGCCGACCGTCCGGTGGACTCGTTGTCGGGAGGGCAGCGC
CAGCGCGTCTGGATATCGATGACGCTTGCTCAGGGCACCGACCTGCTGCTGCTGGACGAGCCGACCACGTATCTCGACCT
GGCGCACGCGATCGACGTCCTCGACCTGGTGGACGACCTGCACGAGTCCGGCCGCACCGTGGTCATGGTGCTGCACGACC
TCAACCTCGCCACCCGGTACAGCGACAACCTCGTCGTCATGCGGGCGGGTTCGATCCTGGCGCAGGGGCACCCGCGCGAC
GTGATCACGGTTGAGCTGCTGCACGAGGCGTTCGGGCTGAACGCCAAGGTGATCGACGATCCGGTGGGGGACCGGCCGCT
CATCGTGCCCATCGGGCGGACCCATGTGCAGCTCAACTGA

Protein sequence : 
MGAQHGTTKHSAASDEARLAARGVTVGYGGRTVIDGLDVTVPSGLITTIIGPNGCGKSTLLRTLTRLLKPASGAVVLDGE
DIAGLRTRDVAKKLGLLPQAPVAPEGLTVADLVARGRHPHQSWLRQWSSDDASVVERALAMTGVSELADRPVDSLSGGQR
QRVWISMTLAQGTDLLLLDEPTTYLDLAHAIDVLDLVDDLHESGRTVVMVLHDLNLATRYSDNLVVMRAGSILAQGHPRD
VITVELLHEAFGLNAKVIDDPVGDRPLIVPIGRTHVQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-67 62
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-56 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-50 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-50 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-56 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-59 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-59 47
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_0311 YP_004921295.1 Fe+3-siderophore ABC transporter ATP-binding protein BAC0164 Protein 2e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_0311 YP_004921295.1 Fe+3-siderophore ABC transporter ATP-binding protein VFG0925 Protein 5e-59 54
Sfla_0311 YP_004921295.1 Fe+3-siderophore ABC transporter ATP-binding protein VFG1042 Protein 2e-50 48