Gene Information

Name : Sfla_2118 (Sfla_2118)
Accession : YP_004923069.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2563429 - 2565075 bp
Length : 1647 bp
Strand : -
Note : KEGG: sma:SAV_3087 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
ATGACAACACCGCTGGTCCAGGTCGAGGACCTGACCGTCGACTTCGGCGACGTCCGGGCCGTGGACGGGCTCTCCTTCAC
GCTGGAGGCGGGCGCCGCCCTCGGTGTGGTCGGGGAGTCCGGCTCCGGCAAGAGCGCCTCGGCCTCCGCGCTGCTCGGAC
TGCACCGGGGCACGGGCGCCCGGGTCACCGGGACCGTCCGGGTCGCCGGTACGGACGTCGGCGCCGCGGACGAGGCGGAG
CTGCGCGCCCTGCGGGGGGCGAAGGCGGCGATGGTCTTCCAGGACCCGCTCTCCTCGCTCGACCCCTATTACACGGTCGG
CGACCAGATCGCCGAGGTCTACCGGGTGCACAACAGGGTCTCCCGGCGAGCCGCCCGCGCCCGGGCCGTGGAGGTCCTGG
ACCGGGTCGGCATCCCGGACGCGGTCCGCCGGTCCCGGTCCCGGCCCCACGAGTTCTCCGGCGGGATGCGGCAGCGCGCC
CTCATCGCGATGGCCCTGGCCTGCGAACCCCGGCTGATCGTGGCCGACGAGCCGACCACCGCCCTCGACGTCACCGTGCA
GGCGCAGATCCTGGACCTGCTGCACGACCTGCGCCGCGAGACCGGAACGGCGCTGCTGCTGGTCACCCACGACGTGGGTG
TCGCCGCGGAGAGCGTGGACGAGGTCCTGGTCATGCAGCACGGCCGGGCCGTGGAGCGGGGGCCGGTCGCCGAGGTGCTT
GGCGCGCCCCGGCAGCCGTACACCCGGGAGCTCCTGGCCTCGGTGCCCCGGGTCGACGCGCGGCGGCCCGCGGGCCCCGT
CCCCGGCCCGCGGGCCGCCGCGCCGGACACCGGACCGCTCCTCGAAGCCCTCGGCCTCCGGCGCGAGTTCGGCCGTGGTT
CCTCCCGCGTCACCGCCGTGGACGACGTCTCGCTCACCGTCCACGCCGGCGAGACCCTCGGCATCGTGGGGGAGAGCGGC
AGCGGCAAGACGACGCTCGGCCGCATGCTCGTGCGGCTCGACGACCCTACGGGCGGCCGGCTCCGGTACGGCGGCAGGGA
GATCGGCTCGCTGCCGGAGAAGGCCCTCCGCCCGTTCCGCCGCGAGCTCCAGATGGTCTTCCAGGACCCCGTCGCCTCGC
TCAACCCGCGGCGCTCCGTCGGCGAGTCCGTGGCCGACCCGCTCCGTGCCGCCGGTGAGACCGACGAGACCCGGATCCGG
GACCGGGTGAGCGGACTGCTGGAACGGGTCGGTCTCGACGCCGGCCGTTACGAGCGCTATCCGCACGAGTTCAGCGGGGG
GCAGCGTCAGCGGATCGGCATCGCGCGCGTACTCGCCGCCGACCCGAAGCTGATCGTGTGCGACGAGCCGGTCTCCGCGC
TCGACGTCACGACCCAGGCCCAGGTGATCGCGCTCCTCGGCGAGCTCCAGCGCGAGCTCGGCATCGGACTCGTCTTCATC
GCGCACGACCTGGCCGTGGTGCGGCAGGTCAGCGACCGCGTCGCGGTGATGCGGCAGGGCCGGATCGTCGAGCAGGGCGC
GGTCGACGAGGTCTACGGATCGCCCCAGGACGCGTACACGAAACAGCTCCTGGCGGCGGTGCCCACGCTCGACCCCGCGC
GCGCCGCCGCGCGCCGTGCGGCGCGTTCGGAGCTGGCCGTAGCCTGA

Protein sequence :
MTTPLVQVEDLTVDFGDVRAVDGLSFTLEAGAALGVVGESGSGKSASASALLGLHRGTGARVTGTVRVAGTDVGAADEAE
LRALRGAKAAMVFQDPLSSLDPYYTVGDQIAEVYRVHNRVSRRAARARAVEVLDRVGIPDAVRRSRSRPHEFSGGMRQRA
LIAMALACEPRLIVADEPTTALDVTVQAQILDLLHDLRRETGTALLLVTHDVGVAAESVDEVLVMQHGRAVERGPVAEVL
GAPRQPYTRELLASVPRVDARRPAGPVPGPRAAAPDTGPLLEALGLRREFGRGSSRVTAVDDVSLTVHAGETLGIVGESG
SGKTTLGRMLVRLDDPTGGRLRYGGREIGSLPEKALRPFRRELQMVFQDPVASLNPRRSVGESVADPLRAAGETDETRIR
DRVSGLLERVGLDAGRYERYPHEFSGGQRQRIGIARVLAADPKLIVCDEPVSALDVTTQAQVIALLGELQRELGIGLVFI
AHDLAVVRQVSDRVAVMRQGRIVEQGAVDEVYGSPQDAYTKQLLAAVPTLDPARAAARRAARSELAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-92 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-69 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-69 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-69 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-69 43