Gene Information

Name : Sfla_1800 (Sfla_1800)
Accession : YP_004922752.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2190351 - 2191391 bp
Length : 1041 bp
Strand : -
Note : PFAM: transport system permease; KEGG: sgr:SGR_1953 iron ABC transporter

DNA sequence :
GTGGAACCGACGGAGGCGGCCCCCGGACGCCGCCGTGTGCGCAGCCGTCCCGTGCTGGCCCTCGGCCTGCTCGTCGCCGT
GGCCGTCCTGCTCCTGACGGTGCTGGCGAGCCTCGCCGTCGGCTCGGGGGACGTGGCCCTCGCCGACGTGCTGGACGGCG
TGTTCCACCCCGACCTCGGGGTCAAGGGCCAGCTCATCGTCCAGGAGGTGCGCGTCCCCCGCACCGTGGCCGGACTGCTG
GCCGGCGCGGCGCTCGGCCTGGCGGGCACGGTGATGCAGGGCGTCGCCCGCAATCCGCTCGCCGACCCCCAGCTCCTCGG
CGTCAACGCGGGCGCCTCGGTCGCCGTGGTGTGCTCCATCAGCTTCTTCGGTCTCACGGCCGCCACCCAGTACATCTGGT
TCGGCTTCCTCGGCGCGCTCCTGGCCGCCCTCCTCGTGTACGGCGTCGGCTCGCTCGGCCGCGAGGGCGCCACCCCGGTG
AAACTCGCGCTGGCCGGAGCGGCGACGAGCGCCGTGCTCACGTCCGTCACCAGCGCGGTCCTCCTCCAGGACCGCGAGAG
TTACGACCGCTTCCGCTTCTGGCAGCTCGGCGCGCTCACCGCCAGGGACGCGGACGTGCTGTGGCAGGTCTCCCCGTTCG
TGGTGGCCGGAGCCGTCCTCGCGCTGCTGCTCGGCCCGCAGCTCAACGCCCTCTCCCTCGGCGACGACCTGGCCCGCGGC
CTCGGCCAGCGTGTCGGCACGGCCCGGCTGGTCTCGGCGCTCGCCGTGGTGCTGCTGTGCGGCTCGGCGACCGTCGTCGC
GGGCCCGATCGGCTTCGTCGGTCTCGCCGTTCCGCACGCCGCCCGGCTGATCACGGGCCCCGACCACCGCTGGGTGCTCC
CGTACAGCATGGTGCTCGCCCCGGTCATGCTGCTCGTCGCCGACATCGTCGGCCGGGTCGTCGCCCCGCCGGGCGAGGTC
CAGGTGGGCGTGGTCACCGCCGCCATCGGCTGCGTCCCCTTCATCTGGCTCGTCCGGCGCAGGAAGCAGGTGGAACTGTG
A

Protein sequence :
MEPTEAAPGRRRVRSRPVLALGLLVAVAVLLLTVLASLAVGSGDVALADVLDGVFHPDLGVKGQLIVQEVRVPRTVAGLL
AGAALGLAGTVMQGVARNPLADPQLLGVNAGASVAVVCSISFFGLTAATQYIWFGFLGALLAALLVYGVGSLGREGATPV
KLALAGAATSAVLTSVTSAVLLQDRESYDRFRFWQLGALTARDADVLWQVSPFVVAGAVLALLLGPQLNALSLGDDLARG
LGQRVGTARLVSALAVVLLCGSATVVAGPIGFVGLAVPHAARLITGPDHRWVLPYSMVLAPVMLLVADIVGRVVAPPGEV
QVGVVTAAIGCVPFIWLVRRRKQVEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 4e-30 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 4e-30 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-14 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-14 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-14 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_1800 YP_004922752.1 transport system permease VFG0926 Protein 1e-30 52