Gene Information

Name : Sfla_1798 (Sfla_1798)
Accession : YP_004922750.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2188395 - 2189222 bp
Length : 828 bp
Strand : -
Note : KEGG: sgr:SGR_1951 Fe3+-siderophore ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGGCCGAGCACACTCTCCGGGCCAGGGGCGTCCGCCTCGGCTACGGCGACCGGGAGATCGTCTCCGGGCTGGACGTGAC
CGTCCCGCCGGGGCGGATCACCGTCATCGTGGGCCCGAACGCCTGCGGGAAGTCGACCCTGCTGCGGGCGATGGCGCGGC
TGCTCGCACCCTCGGAGGGCGCCGTCCTGCTGGACGGCCGGAGCATCCAGGACATGCCCACGAAGGAGGTCGCCGCGGTG
CTCGGCATCCTGCCGCAGAGCCCGTCCGCCCCGGAGGGCATCACGGTCTCCGACCTCGTGGGGCGCGGCCGCTATCCGCA
CCAGGGCTGGTTCCGGCGCTGGGCCGCCGAGGACGACGAGGCGGTCGCCCGGGCGCTGCTCTCCACCGGCACGCTGGACC
TCGCCGACCGGCCGGTGGACGAGCTCTCGGGCGGGCAGCGCCAGCGGGTGTGGATCGCCATGGCGCTCTCGCAGCGCACG
GACATCCTGCTGCTGGACGAGCCGACCACCTTCCTGGACGCCAGCCACCAGTTGGACGTCCTGGACCTGCTCACCGACCT
GAACCACGAGCACGGCGTCACCATGGTGGCGGTGCTGCACGACCTGAACCTGGCCTGCCGTTACGCCGACCACATGATCG
CCATGAAGGACGGGCGGATCGTCGCCGAGGGCCGGCCCTCGGACATCGTGACGGAGCCGCTGGTCGGTGAGGTGTTCGGG
ATGCGCTGCTCGGTCATGGAGGACCCGGCGTCCGGCACGCCGATGGTGGTGCCGCTGGGCCGCCACCACGTGAGGGAAGC
GGGCGCCCACCCCACTGTCCGCTCATGA

Protein sequence : 
MAEHTLRARGVRLGYGDREIVSGLDVTVPPGRITVIVGPNACGKSTLLRAMARLLAPSEGAVLLDGRSIQDMPTKEVAAV
LGILPQSPSAPEGITVSDLVGRGRYPHQGWFRRWAAEDDEAVARALLSTGTLDLADRPVDELSGGQRQRVWIAMALSQRT
DILLLDEPTTFLDASHQLDVLDLLTDLNHEHGVTMVAVLHDLNLACRYADHMIAMKDGRIVAEGRPSDIVTEPLVGEVFG
MRCSVMEDPASGTPMVVPLGRHHVREAGAHPTVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-63 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-68 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-68 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-61 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-61 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-61 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-61 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-49 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-51 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_1798 YP_004922750.1 Fe3+-siderophore ABC transporter ATP-binding protein BAC0164 Protein 1e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_1798 YP_004922750.1 Fe3+-siderophore ABC transporter ATP-binding protein VFG0925 Protein 4e-76 57
Sfla_1798 YP_004922750.1 Fe3+-siderophore ABC transporter ATP-binding protein VFG1042 Protein 1e-49 43