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Name : ydcT (SCAT_p0778) Accession : YP_004920070.1 Strain : Genome accession: NC_016113 Putative virulence/resistance : Resistance Product : spermidine/putrescine ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 863848 - 864840 bp Length : 993 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGGGCGAGGTGGCCACACCGGCGGTTCGGCTGACCGGGGTCCGCATGGAGTACGGCCGGGTGCGCGCCGTGGACGGGGT CGATCTGGAGGTCCCGGAAGGGGAGTTCTTCGCGCTGCTCGGCCCCTCCGGGTCGGGCAAGACCACGCTGCTGCGGCTGA TCGCCGGGTTCGAGACCCCCACGGCGGGGCGGGTGGAGCTGGGCGGCGCCGAGGTGACCGCGCTGCCGCCGTACCGCCGT GACGTGCACACCGTCTTCCAGGACTACGCGCTCTTCCCGCAGATGACGGTGGCCGAGAACGTGGCCTACGCGCTGACCGT GCGCCGGGTGCCGCGCGCGGAACGGCGGGCCCGGGCGCGTGAGGCGCTGGCCATGGTGCGCCTCGCCGGGCACGAGGGGC GGCGGCCCGGCCAGTTGTCCGGCGGGCAGCGGCAACGGGTGGCGCTCGCCCGGGCGCTGGTGGACCGCCCCCGGGTGCTG CTGCTGGACGAGCCGCTGGGCGCCCTCGACCTGAAACTCCGTCAGGAGATGCAGACCGAGCTGAAGGCGTTGCAGCGCAC CACCGGCATCACCTTCCTGCTGGTCACCCACGACCAGGAGGAGGCGATGACGATGAGCGACCGCATCGCGGTGGTCCGTG ACGGCCGCATCGAGCAGACCGGCCCGCCCGCCGAGGTCTACCGGCGCCCGGCCACCGCGTTCGTGGCCTCCTTCATCGGC ACCGCCAACCTGCTGGACGGCACCACCGGCATCCGCCCCGAGCGGCTGCGGCTGGCGCCACCCGGCACCGCGCCCGGACC GGACGAGCGGGCGGCGGCCGGACGGATCGACACCGTCACCCCGCTCGGGCCGCACACCCGGATCACGGTGGCCCTCGACG ACGGCGGCCGGCTCACCGTGCTCCGCCCCGACGACGGCCGCACGGCACCGGTGGCGGCCGGCGGGCGCACCGTCGTCCTA TGGAACCGGGACCACGTCTTCCGCATCCCGTGA Protein sequence : MGEVATPAVRLTGVRMEYGRVRAVDGVDLEVPEGEFFALLGPSGSGKTTLLRLIAGFETPTAGRVELGGAEVTALPPYRR DVHTVFQDYALFPQMTVAENVAYALTVRRVPRAERRARAREALAMVRLAGHEGRRPGQLSGGQRQRVALARALVDRPRVL LLDEPLGALDLKLRQEMQTELKALQRTTGITFLLVTHDQEEAMTMSDRIAVVRDGRIEQTGPPAEVYRRPATAFVASFIG TANLLDGTTGIRPERLRLAPPGTAPGPDERAAAGRIDTVTPLGPHTRITVALDDGGRLTVLRPDDGRTAPVAAGGRTVVL WNRDHVFRIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-23 | 43 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-23 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ydcT | YP_004920070.1 | spermidine/putrescine ABC transporter ATP-binding protein | BAC0604 | Protein | 2e-31 | 42 |
