Gene Information

Name : sio (SCAT_p0348)
Accession : YP_004919640.1
Strain :
Genome accession: NC_016113
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 411407 - 412183 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGCCGCGTCCCTTCCCGTCCTCCGGCCCCTCCGGCACCGCACCGGCCGCCTGTGCCGTCGGTCTGACCAAGGTGTACGG
GCGGGGTGAGACCCGGGTCACCGCGTTGGACGCGGTGTCGGTCGAGTTCGCGCGCGGTCGGTTCACCGCGGTCATGGGCC
CGTCCGGGTCCGGGAAGTCGACCCTGATGCATTGTGTGGCCGGGCTGGAGCCGGTGACCTCGGGTTCGGTCCGGATCGGG
GCCACCGAGCTGGCGCCGTTGGGAGAGCGGGAGCTGACCCGGTTGCGCAGGGAGAAGGTCGGGTTCGTGTTCCAGGGCTT
CAACCTGCTGCCGACGCTCACCGCGGCGGAGAACATCACGTTGCCCTCGCTCCTGGCCGGACGGCGGCCCGACGCGGGGT
GGATGGAGACCGTGGTCGCCACCGTCGGGCTGACCGGCCGGCTCGCCCACCGCCCCGCGGAACTCTCCGGCGGTCAGCAG
CAGCGGGTCGCGGTGGCCCGCGCGCTGGTCTCCCGGCCCGAGATCGTCTTCGCCGACGAGCCGACCGGCAACCTCGACTC
ACGGACCGGCGCGGAGATCCTCGGCTTCCTGCGCGACTGCGTACGGGAGTTGGGGCAGACGGTGGTGATGGTGACCCACG
ACCCGGTGGCCGCCGCCCACGCGGACCGGGTGGTCTTCCTCGCCGACGGCCGGGTCGTCGACGAACTGCGCGAACCGGCC
GCCGAGACGGTACTCGAACGGATGCCACGGCCCGCCGCCCAGGGCCGCACCCGCTGA

Protein sequence :
MPRPFPSSGPSGTAPAACAVGLTKVYGRGETRVTALDAVSVEFARGRFTAVMGPSGSGKSTLMHCVAGLEPVTSGSVRIG
ATELAPLGERELTRLRREKVGFVFQGFNLLPTLTAAENITLPSLLAGRRPDAGWMETVVATVGLTGRLAHRPAELSGGQQ
QRVAVARALVSRPEIVFADEPTGNLDSRTGAEILGFLRDCVRELGQTVVMVTHDPVAAAHADRVVFLADGRVVDELREPA
AETVLERMPRPAAQGRTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sio YP_004919640.1 hypothetical protein CP001581.1.gene598.p Protein 2e-44 46
sio YP_004919640.1 hypothetical protein NC_012469.1.7686878. Protein 5e-35 45
sio YP_004919640.1 hypothetical protein NC_008702.1.4606598. Protein 3e-36 44
sio YP_004919640.1 hypothetical protein CP001581.1.gene798.p Protein 3e-40 43