Gene Information

Name : liaR (SCAT_p1170)
Accession : YP_004920460.1
Strain :
Genome accession: NC_016113
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein liaR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1243202 - 1243834 bp
Length : 633 bp
Strand : -
Note : -

DNA sequence : 
GTGACCATACGCCTGCTGATCGTCGACGACCACCCCATCGTCCGGGACGGCCTGCGCGGTGTCTTCGACGGCGACCCGGA
CTTCGAGGTGGCCGGCGAGGCGGGCGACGGCGCCGAAGGCGTGCACCGCGCCCTCGCCCTCGGGGTGGACGTGGTGCTGA
TGGACCTGCGGATGCCCGGCACCGGCGGGGTCGAAGCCATCGGCCTGCTGCGGGAACGCGCCCCGGACATCCGCGTCCTG
GTGCTCACCACCTACGACAGCGACGCCGACGTGCTCCCCGCCATCGAGGCCGGGGCCACCGGCTACCTGCTCAAGGACGC
CCCGCGCGAGGAACTGGTGCGCGCGGTACGCGCCGCCCACCAGGGCCAGGCCGTCCTCGCCCCCACCGTCGCCCAGAAAC
TCCTCACCCACATGCGCCGCCCCACCACGGCCCCCGAACAGCCGCCCACCGACCGCGAGTTGGAAGTGCTGCGCCTGGTG
GCCGCCGGCACCACCAACAAGGACGCCGCCCGACGCCTCTTCATCAGCGAGGCCACCGTCAAGACCCACCTGCTCCACCT
CTACGCCAAACTGGGCGTCCGCGACCGCGCGGCGGCGGTCGCCGAGGGGTACCGCAAGGGGCTGCTGAGCTGA

Protein sequence : 
MTIRLLIVDDHPIVRDGLRGVFDGDPDFEVAGEAGDGAEGVHRALALGVDVVLMDLRMPGTGGVEAIGLLRERAPDIRVL
VLTTYDSDADVLPAIEAGATGYLLKDAPREELVRAVRAAHQGQAVLAPTVAQKLLTHMRRPTTAPEQPPTDRELEVLRLV
AAGTTNKDAARRLFISEATVKTHLLHLYAKLGVRDRAAAVAEGYRKGLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
narP YP_217238.1 transcriptional regulator NarP Not tested SPI-12 Protein 7e-23 42
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
liaR YP_004920460.1 transcriptional regulatory protein liaR VFG1824 Protein 4e-24 41