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Name : pilB (MEALZ_0678) Accession : YP_004915970.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Virulence Product : type 4 fimbrial assembly protein pilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 742352 - 744070 bp Length : 1719 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1971619, 8100347, 8820654; Product type s : structure DNA sequence : ATGGCAACAGATTTAATCGACCTGCCGATCGGCGGGTTGCCGAAATGTTTGGTACAAGCCGGCCTGATTACCGAGGCGGA TATGCAGTTGCATATGCAGGCAGCGAGGAAAGCTAAATTACCGCTGATTAGTTATTTAGTGACTAACAAGCTAGTGGATA GCAAATCCGTAACCGCCAAAGCTTCCAAAGAGTTCGGTATTCCGCAGCTCGATCTCGATGCGCTCGATATTCGTAGCTTG CCGGTCAATTTAGTCAGCGAAAAGCTGATTAGAAAGCATCATGCTTTACCTTTGCTTAAGCGCGGAAACCGGTTGTTTTT GGCGGTATCCGACCCCGGCAATTTTCAAGCTCAGGACGAGATAAAGTTTCATACGCGCCTGAATATCGATACGATTCTGG TCGAAGAAGATAAGTTGTCCAAGGCGATCGAGACTTCGCTGGAAGCCGCCGATACCACGATGACCGATTTGCTGGATGCC GACCTGGAGAATTTAGAAATTACCGGGGGCGATCAGGAGCAAGCTGGAGACGAGGTAGCGAGTGATGTGGACGATGCGCC AATCGTCCGTTTCGTTAATAAAATTTTGCTCGATTCGATTAAAAAAGGGGTTTCGGATATTCATCTTGAACCTTATGAAA AAAGCTTTCGAATCCGCTTTCGCGCAGACGGCATGCTCTATGAAGTGGCAAGTCCTCCTCCCAATATCTCGACCCGGATT ATTTCCCGAATCAAGGTCATGGCTAAAATGGATATCGCAGAACGGCGCGTTCCCCAAGACGGGCGGATTAAGATGGCGTT GTCGAAAAATCGGGCAATCGATTTCCGGGTTAATAGTTGTCCGACGCTATTCGGCGAAAAAGTCGTATTGCGTATTCTCG ATCCAACCAGCGCGCAAATCGGCATCGAAAAACTCGGCTTTGAACCCGTCCAACAACAACGGTTTCTTGAGGCGATTAAC CGGCCTTACGGCATGGTTTTGGTAACAGGGCCTACCGGTAGCGGTAAAACTGTTACCCTTTACACAGGCTTGAATCTGCT TAATAGCGTCGAACGGAATATATCGACCGCCGAGGACCCGGTTGAAATTACGGTGCCGGGTATCAATCAGGTTAATATGA ATCCGAAAGCCGGGTTGACCTTTGCCGGTGCCTTGCGGGCTTTTCTTCGACAAGATCCGGATATCATCATGGTCGGTGAG ATACGGGATTTGGAAACCGCCGAAATTGCCGTCAAGGCCGCACAAACGGGCCACTTGGTATTGTCCACGCTGCATACTAA CGATGCGCCGCAAACGTTAAATCGGCTCGTGCAAATGGGCGTGCCGCCGTTTAACATCGTTTCGGCGGTGCATTTGATCA TGGCTCAACGCCTCGCTAGACGCTTATGCGAATATTGTAAGGTCAAATCCGATTTACCGGATTCGGTATTGATTTCGGCC GGTTTCAAGGAAGAGGATCTAGGAAAAATGACAATTTTCACGGCCAATCCTAACGGTTGCGAACATTGCACTAGCGGCTT CAAAGGCCGGGTCGGCATTTATCAGGTTATGCCGATCAGCGAAAATATGCGGAAACTGATTCTGGAAGGCGGCAATACCA TGCAGTTGGCCGAACAAGCCAAAGCCGAAGGCATCAACGACCTACGCGCGTCCGGTCTTGAAAAAGTCTGTCAAGGCATC ACTAGCCTGGAAGAAATCGACCGGGTCACTAAGGAGTAA Protein sequence : MATDLIDLPIGGLPKCLVQAGLITEADMQLHMQAARKAKLPLISYLVTNKLVDSKSVTAKASKEFGIPQLDLDALDIRSL PVNLVSEKLIRKHHALPLLKRGNRLFLAVSDPGNFQAQDEIKFHTRLNIDTILVEEDKLSKAIETSLEAADTTMTDLLDA DLENLEITGGDQEQAGDEVASDVDDAPIVRFVNKILLDSIKKGVSDIHLEPYEKSFRIRFRADGMLYEVASPPPNISTRI ISRIKVMAKMDIAERRVPQDGRIKMALSKNRAIDFRVNSCPTLFGEKVVLRILDPTSAQIGIEKLGFEPVQQQRFLEAIN RPYGMVLVTGPTGSGKTVTLYTGLNLLNSVERNISTAEDPVEITVPGINQVNMNPKAGLTFAGALRAFLRQDPDIIMVGE IRDLETAEIAVKAAQTGHLVLSTLHTNDAPQTLNRLVQMGVPPFNIVSAVHLIMAQRLARRLCEYCKVKSDLPDSVLISA GFKEEDLGKMTIFTANPNGCEHCTSGFKGRVGIYQVMPISENMRKLILEGGNTMQLAEQAKAEGINDLRASGLEKVCQGI TSLEEIDRVTKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-82 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-82 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG1880 | Protein | 9e-160 | 59 |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG0112 | Protein | 3e-160 | 56 |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG0233 | Protein | 9e-120 | 48 |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG2048 | Protein | 5e-83 | 47 |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG1876 | Protein | 3e-77 | 46 |
| pilB | YP_004915970.1 | type 4 fimbrial assembly protein pilB | VFG0182 | Protein | 8e-82 | 43 |
