|
Name : kdsD (MEALZ_0644) Accession : YP_004915936.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 709468 - 710445 bp Length : 978 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12805358; Product type e : enzyme DNA sequence : ATGATGATTCACGAACCCGAATTGCGAAAACTGGCCTTGGCGGTTATTCAAGTCGAGGGCGATGCTGTTACGGCTTTGGC GGAACGGATCGATGACGATTTTATTTTGGCTTGCCGTTTAATGTTTAATTGTAAAGGACGAGTCGTTGTGACCGGAATGG GTAAATCCGGTCATATTGCCGGTAAAATTGCCGCCACTTTGGCGAGTACCGGGACGCCGGCTTTTTTTGTGCATCCCGGT GAGGCAAGTCATGGCGACCTAGGTATGATAACTTCTCAGGATGTAGTCTTGGCTCTCTCGAACTCGGGCGAAACCGGCGA AGTCATTACCATTTTGCCGATCATCAAACGCATCGGTGTGCCTTTGATAGCGATGACCGGCAATCGCGAATCTACATTGG CGAAATTCGCCACGGCGCATATCGATGTTAGCGTTCGTCAAGAGGCCTGTCCTTTAGGGTTGGCACCGACTTCCAGTACG ACCGCGGCGTTGGTGATGGGGGATGCTCTCGCGGTTTCGCTGTTGGAGGCAAGAGGATTTACCCGAGATGATTTTGCATT GTCGCATCCAGGGGGGAGTTTAGGGCGGCGTTTGTTGTTGATGGTCAGCGATATTATGCATACCGGCGATGAAATTCCGA TTGTTCCGGAAACGGCTCTGATTACCGAGGCCTTGTTGGAAATGACCGAGAAAAAAATGGGCATGACCGTGATTGTCGAT CGCTTCGGCAAGAGTGCCGGCATCTTTACCGACGGCGATTTGAGACGGTTCTTGGAAAAAAGTCACGATGTGCATGGAAC ACGTATCGGTGACGCGATGACTCGAAACTTTACCGCGATCGACGCCGATATTCTAGCTGCCGAAGCAATGCAGATTATGC AACAAAAAAAAATCAATGCCTTGATCGTTAACGATGAGTCTCACAAGCCGGTCGGTGCATTGAGCATGCATGACTTGATC CATGCCGGAATTGTCTAA Protein sequence : MMIHEPELRKLALAVIQVEGDAVTALAERIDDDFILACRLMFNCKGRVVVTGMGKSGHIAGKIAATLASTGTPAFFVHPG EASHGDLGMITSQDVVLALSNSGETGEVITILPIIKRIGVPLIAMTGNRESTLAKFATAHIDVSVRQEACPLGLAPTSST TAALVMGDALAVSLLEARGFTRDDFALSHPGGSLGRRLLLMVSDIMHTGDEIPIVPETALITEALLEMTEKKMGMTVIVD RFGKSAGIFTDGDLRRFLEKSHDVHGTRIGDAMTRNFTAIDADILAAEAMQIMQQKKINALIVNDESHKPVGALSMHDLI HAGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 9e-54 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-54 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-53 | 44 |
