Gene Information

Name : MEALZ_0567 (MEALZ_0567)
Accession : YP_004915859.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 634820 - 635794 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence : 
GTGGATCATTTTAATTCGATAATTGGGAAATCTCCCGCACTCGATTCTCTACTCCGTAGCGCGAGAATGGTTGCTTGTAC
CGATGTAACTGTCTTCATCAAAGGAGAAACCGGTACCGGTAAGGAAGTACTAGCTTCCGCTATTCAAAAAGAAAGCGCGC
GTGCTAATAAGCCGTTTATCAAGTTGAATTGCGCCGCCTTGCCCGAAAGTTTAGTAGAGTCTGAATTATTCGGGCATAAA
AAAGGTGCGTTTACCGGAGCTAACGTTAACAAGCAAGGCATCTTTCAAGCTGCTGATGGCGGTACTTTATTCTTGGATGA
AATTAATTCGCTACCGCTGTCGATTCAAGCAAAATTATTGCGTTTTTTGGAATTGGGCGAATGCCTGGCCGTTGGAGAAA
CTAAGCCTTACCGTGTCGATGTCAGAATCATCGCGGCCAGTAACCAAGACTTGGTCAAGCAAATCGACGCAGGACAGTTT
AGGCAGGATTTGTACTTTCGATTAAATGTTGTGCCGCTGGAGTTGCCGCCACTATCGAAAAGAACCGAAGATATCGAGCC
GCTGATCACTCATTTTGTTCGGCACTTCGCGCAGGCTCATTCACTTGAGGCCCCGAAATTCAGTAAACAGTCGGTTCGAG
TTTTAACTCGCTATCGATGGCCTGGTAATATAAGAGAGCTCCGAAATTTATGTGAAAGACTGTCGATTTTGTTGGCCGGA
AAAGTTATCGAGCCCGATAATTTACCGCATGAGTTTGCTGAATATATTGACGAAAAGGCCCCTGCAGCGGATGCAGGCGG
TATTCCGAGTTTTAAACTACCCGATTTCGGTATCCAATTGGACACGCTGGAGGCTGACTTGATTAATCAAGCGCTTACTA
GAACTAACGGCAATCGCAGCAAGTCAGCCCGGTTATTAGGCATTACCCGAGATACCTTGCTATACCGTATACAAAAACAC
GGCTTGGCCGCTTAG

Protein sequence : 
MDHFNSIIGKSPALDSLLRSARMVACTDVTVFIKGETGTGKEVLASAIQKESARANKPFIKLNCAALPESLVESELFGHK
KGAFTGANVNKQGIFQAADGGTLFLDEINSLPLSIQAKLLRFLELGECLAVGETKPYRVDVRIIAASNQDLVKQIDAGQF
RQDLYFRLNVVPLELPPLSKRTEDIEPLITHFVRHFAQAHSLEAPKFSKQSVRVLTRYRWPGNIRELRNLCERLSILLAG
KVIEPDNLPHEFAEYIDEKAPAADAGGIPSFKLPDFGIQLDTLEADLINQALTRTNGNRSKSARLLGITRDTLLYRIQKH
GLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpR AAT96162.1 HrpR Virulence T-PAI Protein 8e-41 42
hrpR AAT96216.1 HrpR Virulence T-PAI Protein 8e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MEALZ_0567 YP_004915859.1 Fis family transcriptional regulator BAC0467 Protein 8e-64 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MEALZ_0567 YP_004915859.1 Fis family transcriptional regulator VFG0116 Protein 5e-51 42
MEALZ_0567 YP_004915859.1 Fis family transcriptional regulator VFG1214 Protein 6e-55 41