Gene Information

Name : yknY (MEALZ_3846)
Accession : YP_004919084.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4432436 - 4433104 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCGCCTGGAAGACATTCACCGGTATTTTCAAGTCGGGGAACAGTCGGTGCATGCCCTCGACGATATCGACCTGAC
CATTGCGCACGGCGAATATCTATCGGTGATGGGGCCGTCGGGTTCCGGAAAGTCGACTTTATTGAATGTGATCGCGCTGC
TGGATCAGCCTAGTTCCGGGCACTATTTTTTAAATGACAGGGATATTACACAGTACAGTGATGACGAATTGGCCAAGGTG
CGCCGCGAAAATATCGGCTTCGTGTTCCAATTTTTTCATTTGATCCCTCGCCTGACCGCCGCCGAAAATGTCGAAATGCC
GATGATGCTGGCCGGAATCGACCGCAAGGAACGGCAACAGCGAATCGAAACAGCCTTGAAGCAAGTCGGTTTATCCGATC
GAGCCGGCCATAGGCCCGATCAATTATCCGGCGGCCAGTTGCAGCGCGTCGCGATCGCCCGAGCGATGATCATGAATCCC
GGTATTCTGCTAGCCGACGAGCCGACCGGCAATCTCGACAGCAAATCGGGCGCCGAAATCATCGATCTATTGGAGCGTCT
TAACGAGCAAGGCGTGACCTTGGTGGTGATCACGCACGACCCGGCGATCGGCGAGCGGGCCAAACGCAAGATTCGTATCG
TGGACGGCAAAATCGAAGCTGAAACATGA

Protein sequence : 
MIRLEDIHRYFQVGEQSVHALDDIDLTIAHGEYLSVMGPSGSGKSTLLNVIALLDQPSSGHYFLNDRDITQYSDDELAKV
RRENIGFVFQFFHLIPRLTAAENVEMPMMLAGIDRKERQQRIETALKQVGLSDRAGHRPDQLSGGQLQRVAIARAMIMNP
GILLADEPTGNLDSKSGAEIIDLLERLNEQGVTLVVITHDPAIGERAKRKIRIVDGKIEAET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yknY YP_004919084.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-61 62
yknY YP_004919084.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-54 48
yknY YP_004919084.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-39 45
yknY YP_004919084.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-38 44