Gene Information

Name : fliP (MEALZ_3166)
Accession : YP_004918416.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP Precursor
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3670151 - 3670897 bp
Length : 747 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1482109, 8282695, 92407478, 9324257, 94110225; Product type s : structure

DNA sequence :
ATGGTTAAATCTTTGCGGACGTGCGGTTTCGTTTTCGCCGTTCTTCTGCCGATGCCGCTTCATGCAACTGGAGTCGAGGC
GTTTACGGTTACGACCAACGCACAGGGCGGCCAAACCTATTCGGTAACGATTCAGATCCTCGCGTTAATGACAATGTTGA
CGGTTTTGCCGTCCTTGTTACTGACGATGACTTCGTTTACTCGGATCATGATTGTTTTGGGACTGTTGCGTCAGGCTTTA
GGGACCGCGCAAGCGCCGAGTAATCAAATTTTGTTGGGTTTGTCGTTATTTTTGACGTTTTTCATCATGGCGCCGGTATT
CGACAAGGTCAATCGCGATGCGATTCAGCCTTATCTCGAGGAAAAAATAGATGTGTTGACCGCTGTCGAGAATGCATCGG
TGCCTTTTCGGCAATTCATGATTAGGCAGACTCGCGAATCCGACCTCGAAATGTTTCTCAGGATTTCCGGTCACGAAGAA
GTCGAATCGGTCGACGATGTGCCGTTTTCGGTATTGTTACCGGCTTATGTGACCAGCGAATTGAAGACGGCTTTCCAAAT
CGGTTTTTTGATTTTTTTGCCTTTTCTGGTGATCGATTTAGTGGTTGCTAGCGTATTGATGTCGATGGGTATGATGATGC
TGTCGCCGATGATTATATCGCTGCCTTTTAAGATAATGCTGTTCGTGATGGCAGACGGGTGGTCGCTGATCATGGAAATG
CTCGCGGCCAGTTTTTATGTGGCTTGA

Protein sequence :
MVKSLRTCGFVFAVLLPMPLHATGVEAFTVTTNAQGGQTYSVTIQILALMTMLTVLPSLLLTMTSFTRIMIVLGLLRQAL
GTAQAPSNQILLGLSLFLTFFIMAPVFDKVNRDAIQPYLEEKIDVLTAVENASVPFRQFMIRQTRESDLEMFLRISGHEE
VESVDDVPFSVLLPAYVTSELKTAFQIGFLIFLPFLVIDLVVASVLMSMGMMMLSPMIISLPFKIMLFVMADGWSLIMEM
LAASFYVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-25 44
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 5e-21 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 5e-21 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 5e-21 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-26 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-22 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-22 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_004918416.1 flagellar biosynthetic protein FliP Precursor VFG2016 Protein 7e-59 63
fliP YP_004918416.1 flagellar biosynthetic protein FliP Precursor VFG2338 Protein 2e-55 62
fliP YP_004918416.1 flagellar biosynthetic protein FliP Precursor VFG1259 Protein 2e-59 62
fliP YP_004918416.1 flagellar biosynthetic protein FliP Precursor VFG2494 Protein 3e-55 57
fliP YP_004918416.1 flagellar biosynthetic protein FliP Precursor VFG0188 Protein 4e-24 41