Gene Information

Name : pykA (MEALZ_3080)
Accession : YP_004918331.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : pyruvate kinase II
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 3581405 - 3582850 bp
Length : 1446 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1732206, 8439398, 91072271, 91315755; Product type e : enzyme

DNA sequence :
ATGTTACGAAGAACCAAAATACTGGCCACTTTGGGCCCCGCAACGGATAAACCCGGGGTCCTGGAAAACTTGTTCAAAGC
CGGCATCGACGTGGTTCGCATGAATTTCTCGCACGGCTCGGCGCAAGACCATATTGACCGAGCCAACAAAGTTCGCGAAT
TAAGCCGCAAAACCGGACGCCGCGTCGGCATATTAGGCGACCTGCAAGGCCCTAAAATACGCATAGCGCGTTTCAAGGAA
ACGAAAGTATGGCTTGATGAAGGCCAGGATTTCGCCTTGGACATCAACTTAGGGCCGAACGACGGCGATAATACCCAAGT
CGGCATCACTTACGAACCGCTGGCTCGCGAAGTGCGCAACGGCAGTCGTTTACTGTTGGACGATGGACGAGTGGTATTAG
ATGTAGTCGATACCGACGGCAAACGCGTCAATTGCAAAGTAGTCGTCGGCGGCGACCTGTCCAACAACAAAGGTATCAAT
TTGATGGGTGGCGGGCTTTCCGCCGCTGCTTTGACCGAAAAAGACAAGGAAGACATCAAAACGATTGCGAAAATCGATTG
CGATTATGTTGCGGTATCTTTTCCTAGATGCGCAGCGGACTTGAACGAAGCACGCGAATTGCTGCTGGCGGAAGGTTGCC
ATGCCGGCATCGTCGCTAAGGTCGAGCGCGCAGAAGCGATGGATGCAATGGATGAAATTATCCTGGCATCCGATGCGGTA
ATGGTCGCTCGTGGCGACTTGGGCGTTGAAATTGGCGACGCTAACCTTCCGGCCGCACAGAAACGACTCATCAGCCGTGC
TCGCGAACTGAATCGCATAGCGATCACTGCGACGCAAATGATGGAATCAATGATCGAAAACCCGATTCCGACTCGCGCCG
AAGTTTTCGACGTTGCGAATGCGGTCGTCGACGGCACCGATGCGATCATGCTATCGGCCGAAACCGCTTCCGGTAAATAT
CCGGTCAAAGCGGTCGAAGCGATGGTACGGGTTTGCGAAGAGACCGAAAAACAGCCGAGCGTTCGAGTTTCGAAGCATCG
TATGGATACGCAATTCCAGCGCATCGACGAAGCGATTGCGATGTCGGCGATGTATATGGCGAATCATACGACGATTCATG
GCATAGCGGCATTGACCGAATCCGGATCGACACCATTATGGATGTCCAGAATCAGCTCGGCAATTCCTATCTTCGCATTT
AGCAGTCAGGAAAAAACTTTAGGCAAGGTAACGCTTTATCGAGGCGTATTTCCGTTCTATTTCGACAAACACTTGAAAGA
ACCGGATCATGCCGAAGTGAACCGTGAAATCGTCAAACAGCTAAGAAAACGCCACCAAGCGCAAAATGGGGATAAATTCA
TCATCACCAAAGGCGATCTAACCGGCGTTCAGGGCGGAACCAACGCATTGAAAGTGATTACAGTGGGTGAAGGCTTAACG
CCTTAA

Protein sequence :
MLRRTKILATLGPATDKPGVLENLFKAGIDVVRMNFSHGSAQDHIDRANKVRELSRKTGRRVGILGDLQGPKIRIARFKE
TKVWLDEGQDFALDINLGPNDGDNTQVGITYEPLAREVRNGSRLLLDDGRVVLDVVDTDGKRVNCKVVVGGDLSNNKGIN
LMGGGLSAAALTEKDKEDIKTIAKIDCDYVAVSFPRCAADLNEARELLLAEGCHAGIVAKVERAEAMDAMDEIILASDAV
MVARGDLGVEIGDANLPAAQKRLISRARELNRIAITATQMMESMIENPIPTRAEVFDVANAVVDGTDAIMLSAETASGKY
PVKAVEAMVRVCEETEKQPSVRVSKHRMDTQFQRIDEAIAMSAMYMANHTTIHGIAALTESGSTPLWMSRISSAIPIFAF
SSQEKTLGKVTLYRGVFPFYFDKHLKEPDHAEVNREIVKQLRKRHQAQNGDKFIITKGDLTGVQGGTNALKVITVGEGLT
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-74 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-57 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-57 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-57 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-56 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_004918331.1 pyruvate kinase II VFG0479 Protein 8e-58 44