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Name : clpB (MEALZ_2998) Accession : YP_004918249.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Virulence Product : Chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3467281 - 3469860 bp Length : 2580 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11061966, 11717522, 14978298, 15208691, 2066329, 2185473, 8376377; Product type f : factor DNA sequence : ATGAGAATGGATAAACTGACCAGCAAGTTTCAGATGGCGTTGGCCGATGCGCAAAGCCTGGCTTTGGGCAAGGATCATCA ATTCATCGAGCCGGCCCATGTGATGCTGGCGTTATTAAATCAGGACGGCGGCAGTATTCGGCCGCTGTTGTCGCAAATCG GCGCAAACCCGAATATCGTACAGGCCGAATTGACCAAGGTGCTTGAACGCACCCCAACCGTTTCAGGAATCGGCGGCGAC GTGCAGATTTCCAACGAATTGTCGCGCTTGTTGAACGTGACCGACAAGCTCGCGCAAAAACGCGGCGACAAATTTATCTC GAGCGAATTGTTTTTATTGGCCGCCTGCGAAACATCGGGCGCTCTGCAAGATATCCTAAAAAAAGCCGGCGTGACCCGAG CGGCTGCGGAAAAAGCCATAGACAATGTCCGTGGCGGACAAAACATCGACGATGCCAACGCCGAGGAGCAACGTCAAGCA TTAAGCAAATACACGATCAATCTGACCGAGCAAGCCGAACAGGGTAAGCTCGATCCGGTGATCGGCCGCGACGACGAAAT CCGCCGCACGATACAAGTCTTGCAGCGCCGCACCAAAAACAACCCGGTATTGATCGGCGAGCCCGGCGTCGGCAAGACCG CGATTGTCGAAGGTTTGGCGCAGCGCATCGTCAACGGTGAAGTTCCCGAAGGTATCAAAGGCAAACAATTGTTGTCCCTC GATATGGCCGCGCTGATCGCCGGCGCGAAATTCCGCGGCGAATTCGAGGAGCGCCTGAAAGCAGTGTTGAACGATATCGC GAAACAACAAGGCCAGGTTATTCTGTTCGTCGATGAATTGCATACGATGGTCGGTGCCGGTAAGGCGGAAGGCGCGATGG ATGCTGGTAACATGCTCAAACCCGCTTTGGCGCGCGGCGAGCTGCATTGCGTCGGTGCGACCACCCTAGACGAATACCGT AAATACATCGAAAAAGACGCGGCCTTGGAGCGCCGTTTCCAAAAAGTCTTGGTCGACGAGCCGAACGTCGAAGATACCAT CGCGATCTTGCGCGGCTTGAAGGAGAAATACGAAGTGCATCATGGCGTCGATATCACCGATCCCGCGATCGTCGCGGCCG CAACGCTCTCGCATCGTTACATTTCCGACCGGCAACTGCCCGACAAGGCGATCGATTTGGTCGATGAAGCGGCAAGCCGC ATTCGCATGGAAATCGACTCGAAACCGGAGGCGATGGATAGGCTGGACCGGCGTTTGATTCAATTGAAGATCGAACGCGA GGCATTGAAAAACGAAACCGATGAAGCGTCTAAAAAACGTTTGGAAAGCCTTGAGGAAGCGATCGAGAACCTGGAAAAAG AATATTCCGAGTTCGACGAAATTTGGAAAGCCGAAAAAGCCGCGCTGCAAGGCACGACCGCGATCAAGGAAAGACTGGAA CAAGCCCGTTTGGAATTGGAAGTTGCCAGTCGCGCGAACGATCTGAGCCGCATGTCGGAATTGCAATACGGCGTGATCCC TTCGCTGGTCAAGGAATTGGATCTGGCGTCGCAGGCCGAAATGCAGGAAATGAAACTGCTTCGCAATAAGGTAACCGATG AAGAAATCGCCGAAGTCGTCTCGAAATGGACCGGTATTCCGGTCTCGAAAATGATGGAAGGCGAGCGCGATAAATTATTG CGCATGGAAGAGCAGATCCAAAAACGCGTGGTCGGACAAACCGAGGCGCTGATCTCGGTTAGCAACGCGATTCGCCGTTC GCGCGCGGGTCTCTCCGACCCGAACCGGCCGAACGGTTCGTTCCTGTTCTTGGGGCCGACCGGCGTCGGCAAAACCGAAC TGTGCAAGGCATTGGCCGAATTCTTGTTCGATACCGAAGAAGCGATGGTGCGCATCGACATGTCCGAATTCATGGAGAAG CATTCGGTCGCGCGTTTGATCGGCGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGTTATTTGACCGAAGCGGTGCG GCGCAAGCCTTATTCGGTAATTTTGCTCGACGAGGTCGAAAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGCAAGTGC TCGACGACGGCCGGTTGACCGATGGGCAGGGCAGAACGGTCGATTTCCGCAATGCCGTCGTCGTGATGACGTCGAACCTC GGTTCGGACCGAATACAGGAGTTGGCAGGCGAAGAAAACTATGCGGCAATGAAATCGGCGGTTATGGAGGTAGTCGGCTA CCATTTCCGTCCGGAGTTCATCAACCGTATCGACGACGTCGTCGTGTTCCATCCGCTCGGCCGCGACCAAATCCGGTCGA TTACCGATATTCAGATCCGTTATCTGCGCAAACGTTTGCTCGATCACGATATCGATCTTGAGTTGAGCGAGGCGGCGCTG GATAAACTCGGTGAAGCCGGATTCGACCCGGTTTACGGCGCAAGACCGCTGAAACGCGCGATACAACATCAATTGGAAAA CCCGCTGGCGCAAGAGATTCTTGGCGGAAAATTCGGTCCAGGCGACAAAATTGTTGTCGATGTCGAGGGCGGGACATTGG CGTTTTCGAAAGCGGCTTGA Protein sequence : MRMDKLTSKFQMALADAQSLALGKDHQFIEPAHVMLALLNQDGGSIRPLLSQIGANPNIVQAELTKVLERTPTVSGIGGD VQISNELSRLLNVTDKLAQKRGDKFISSELFLLAACETSGALQDILKKAGVTRAAAEKAIDNVRGGQNIDDANAEEQRQA LSKYTINLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKQLLSL DMAALIAGAKFRGEFEERLKAVLNDIAKQQGQVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKEKYEVHHGVDITDPAIVAAATLSHRYISDRQLPDKAIDLVDEAASR IRMEIDSKPEAMDRLDRRLIQLKIEREALKNETDEASKKRLESLEEAIENLEKEYSEFDEIWKAEKAALQGTTAIKERLE QARLELEVASRANDLSRMSELQYGVIPSLVKELDLASQAEMQEMKLLRNKVTDEEIAEVVSKWTGIPVSKMMEGERDKLL RMEEQIQKRVVGQTEALISVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNL GSDRIQELAGEENYAAMKSAVMEVVGYHFRPEFINRIDDVVVFHPLGRDQIRSITDIQIRYLRKRLLDHDIDLELSEAAL DKLGEAGFDPVYGARPLKRAIQHQLENPLAQEILGGKFGPGDKIVVDVEGGTLAFSKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-105 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-103 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004918249.1 | Chaperone protein ClpB | VFG2076 | Protein | 4e-109 | 41 |
