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Name : lysS (MEALZ_2010) Accession : YP_004917290.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2301023 - 2302519 bp Length : 1497 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2183178, 7473706; Product type e : enzyme DNA sequence : ATGTCCGAACTTTTGCAAGACGAACAAGAACAAATCAGACAACGCCGCAGCAAACTGATTGAAATACGTGAGCGCGGCAT AGCATTTCCTACGGATTTTCGTCGTAATGTCGTAGTCGGCGAACTGCTGGCGGAATACGGCGAAAAAACCAAGGAAGAAC TCGAGGCCGAACCGATCCGCGTCAAGGTGGCCGGACGCATGATGACTCGCCGCATCATGGGCAAGGCGAGTTTCTGTCAT ATTCAGGATATGTCGGGGCAAATGCAGCTTTATGTCGCGCGCGATCATCTGCCGGAAGGCTTTTATAACGAGCAGTTCAA GAAATGGGACATCGGCGACATCGTCGGTGCCGAGGGCGTGTTGTTTAAGACCAATGTCGGCGAATTGAGCATCAAAGTCG ACGATATTCGTTTATTGACCAAAGCGCTTAGGCCATTGCCTGAAAAATTCCACGGCATCGCCGATCAGGAAATCAAATAT CGCCAGCGTTATTTGGATTTGATCATGAGCGATCAATCGCGCAAGACTTTCCTGATCCGTTCGAAAATCGTCACATACAT TCGAGACTTCTTGGTCGCGCGACAATTTCTCGAGGTCGAAACGCCAATGATGCAGGCGATTCCCGGCGGTGCGACCGCGC GTCCGTTCAAGACGCATCACAATGCCTTGGACATGGAGTTGTTTTTACGCATTGCGCCGGAATTGTATTTAAAACGACTG ATCGTTGGCGGTTTCGAACGCGTTTTCGAAATCAACCGTAATTTCCGCAACGAAGGCCTGTCGACACGGCATAATCCGGA ATTCACGATGCTTGAATTCTATCAAGCCTATGCCGAGTATCACGACTTGATGGATTTGACCGAAGAAATGGTGCGAGGCA TTGCACTCGAAGTACTCGGCCAAACGCTGATTACTTATCAAGGCGAACACTACGACTTCGGCAAACCGTTCGATCGCATG ACCGTGGTCGAATCGATTCTGCATTTCAATCCGGATTTGACGGTCGATGATCTCGCGACGCGCGAAGCGTCGGCGAAGGT GGCCGAAAATTTGAAAATTCCGGTCAAGGACGGCTACGGTCTCGGTAAGCTTCAGATCGAGATCTTCGAAAAAACGGTCG AACACCGCTTGATGAATCCGACCTTTATTACTGCGTATCCGGTCGAAGTGTCGCCATTGGCCAGACGTAACGATGATGAC CCGCATGTGACCGACCGTTTCGAGTTTTTCGTCGGCGGGCGCGAAATCGCGAACGGTTTCACCGAGTTGAACGACGCCGA GGATCAGGCCGAACGTTTCCGTAAACAAGTCGAGGAAAAAGAAGCCGGCGACGACGAAGCGATGCATTACGACGCCGACT ATGTCACGGCATTGGAACACGGCATGCCCCCGACGGCGGGCGAGGGCATAGGCATCGATCGTCTGGTGATGCTGTTCACC GACGCGCCTTCGATTCGAGATGTATTGTTATTCCCACATCTTCGGCCTAAGAATTAA Protein sequence : MSELLQDEQEQIRQRRSKLIEIRERGIAFPTDFRRNVVVGELLAEYGEKTKEELEAEPIRVKVAGRMMTRRIMGKASFCH IQDMSGQMQLYVARDHLPEGFYNEQFKKWDIGDIVGAEGVLFKTNVGELSIKVDDIRLLTKALRPLPEKFHGIADQEIKY RQRYLDLIMSDQSRKTFLIRSKIVTYIRDFLVARQFLEVETPMMQAIPGGATARPFKTHHNALDMELFLRIAPELYLKRL IVGGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYAEYHDLMDLTEEMVRGIALEVLGQTLITYQGEHYDFGKPFDRM TVVESILHFNPDLTVDDLATREASAKVAENLKIPVKDGYGLGKLQIEIFEKTVEHRLMNPTFITAYPVEVSPLARRNDDD PHVTDRFEFFVGGREIANGFTELNDAEDQAERFRKQVEEKEAGDDEAMHYDADYVTALEHGMPPTAGEGIGIDRLVMLFT DAPSIRDVLLFPHLRPKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-146 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 7e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004917290.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-146 | 59 |
