Gene Information

Name : sciH (MEALZ_1931)
Accession : YP_004917211.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : cytoplasmic protein,SciH
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2223097 - 2223627 bp
Length : 531 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :

ATGGCTGAAAGCAGTCAAAAGTTTATCGCGCGTAATCGTGCGCCGCGAGTACAAATCGAATACGATGTCGAACTCTATGG
TGCGGAGAAAAAAGTTCAACTGCCTTTCGTGATGGGAGTACTCGCTGATTTGTCGGGAAAACCCGCCGATCCATTGGCGC
CTGTCGCAGATCGTAAAATGCTCGAAATCGATGTGGACAACTTCAATGATCGACTCAAGGCAATGAAACCTCGTGTCGCA
TTTACGGTGCCCAACACCTTGACGGGTGAAGGCAATTTGAATGTCGATCTTACTTTCGAAAGCATGGATGATTTTTCGCC
GGCGGCTGTGGCAAGAAAAGTAGACGGACTGAATAAATTGTTGGAAGCGAGAACGCAATTGGCAAATTTGGTCACTTATA
TGGACGGAAAAGGCGGCGCCGAAGAATTGATAGCGAAGGTAATCAATGATCCGGCTTTATTGCAGTCGCTGACCGCTGCG
CCGAAGCCGGCCGATCCAGCCGAAGCAAAAACCGAGGAAGGAGGAGAGTAA

Protein sequence :

MAESSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVLADLSGKPADPLAPVADRKMLEIDVDNFNDRLKAMKPRVA
FTVPNTLTGEGNLNVDLTFESMDDFSPAAVARKVDGLNKLLEARTQLANLVTYMDGKGGAEELIAKVINDPALLQSLTAA
PKPADPAEAKTEEGGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-57	73

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sciH	YP_004917211.1	cytoplasmic protein,SciH	VFG2069	Protein	2e-61	86