Gene Information

Name : MEALZ_1780 (MEALZ_1780)
Accession : YP_004917060.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Resistance
Product : D-alanyl-D-alanine dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 2049256 - 2049912 bp
Length : 657 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 9687406, 9736537; Product type e : enzyme

DNA sequence :
ATGCTCGCGCTGTTATCGCTTAAAACATTTAATCCTGCTTATGCGCAAGTACAAGAAGACTTTGTTTATGTCGATACGCT
TATTCCATCTATCCATTTAGATATTCGTTATGCGAGCGCCAATAACTTTATCGGCGGGCCTATCGATGGTTATTACCGGC
CATGCGCATTATTGACTCAGACAGCAGCCGAAGCGTTGATGGCGGCGCAAAATGAGTTGGCAAAATTTAATTTAGGCTTG
AAAATTTTTGATGCTTATCGGCCTCAGCGCGCCGTGCGGCATTTTGTGCGTTGGTCGCAAGATGCGGATGATGTGGCTAT
GAAGGATGTTTATTATCCTCATCTGGACAAGCCAAGCTTGATTGAAGAAGGTTACATTGCCGCACGTTCTTCGCATAGTC
GGGGCAGTACGGTTGATGTAACGCTGGTTGATTTAAACAATGGCGAAGAACTGGATATGGGCGGTTTTTTTGATTATTTT
GGCCCGGAGTCCTGGTCTTATGCTAAGACGCCTACGACTATGCAACGAGCGCACCGGATGTTATTGCAAACGGTTATGGA
AAAACAGGGATTCGTACATTACCCTCAGGAATGGTGGCATTTTACCTTGGCGAACGAGCCTTATCCCGATACGTATTTCG
ATTTTCCGGTGCAATGA

Protein sequence :
MLALLSLKTFNPAYAQVQEDFVYVDTLIPSIHLDIRYASANNFIGGPIDGYYRPCALLTQTAAEALMAAQNELAKFNLGL
KIFDAYRPQRAVRHFVRWSQDADDVAMKDVYYPHLDKPSLIEEGYIAARSSHSRGSTVDVTLVDLNNGEELDMGGFFDYF
GPESWSYAKTPTTMQRAHRMLLQTVMEKQGFVHYPQEWWHFTLANEPYPDTYFDFPVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 3e-38 42
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 3e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase U82965.2.orf32.gene. Protein 1e-39 47
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase AE016830.1.gene2249. Protein 1e-38 42
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase AF130997.1.orf5.gene Protein 2e-36 42
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase U35369.1.gene7.p01 Protein 5e-39 42
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase AF310956.2.orf6.gene Protein 1e-37 41
MEALZ_1780 YP_004917060.1 D-alanyl-D-alanine dipeptidase AF155139.2.orf6.gene Protein 2e-37 41