Gene Information

Name : qseB (MEALZ_0154)
Accession : YP_004915459.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 171703 - 172362 bp
Length : 660 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 21927389; Product type r : regulator

DNA sequence : 
ATGCGGCTATTATTGGTCGAAGACGATGAAATTCTGGGCGACGGCATACAAGCCGGCCTAACGATGGAAGGCTATGCGGT
CGATTGGCTTAGGAACGGCACGCAGGCAGATGAAGCACTGAAATCCAACAGTTATGAACTGATTGTAATGGATCTTAATC
TGCCGGGCATGGACGGCTTAAACCTACTTTCCGAAATCAGAAAACGAAAAGATGAAACCCCGGTCTTGATCTTAACAGCA
AGGGACGGTATCGACGATCGAGTTACTTTACTCGATAGCGGCGCCGACGACTTTGTCGTTAAACCGTTCGATTTATCGGA
AGTCTGCGCCCGCCTTCGAGCACTAGCCAGAAGACAAGCGGGAAGAAGCGTCTCTCAAATCGAACATAAAGGCATCGTGC
TAGATCCCGCCGCGCATACCGTCACGATCCATAACACCCCGGTTAATTTATCGCAAAAGGAATTCGGCATTTTAAATTTT
TTAATGAATAATATCGGTAAGGTCGTTTCCAAGGCGCGTATCGAGGAAGCCTTATATTCCTGGGGTTCTGAAATAGAAAG
CAATACTGTCGAAGTGCATATCCACCATCTACGCAAAAAGCTAGGCTCGGATTACATCCGCACAGTCAGAGGCGTCGGCT
ACATACTCGATGAGAATTAA

Protein sequence : 
MRLLLVEDDEILGDGIQAGLTMEGYAVDWLRNGTQADEALKSNSYELIVMDLNLPGMDGLNLLSEIRKRKDETPVLILTA
RDGIDDRVTLLDSGADDFVVKPFDLSEVCARLRALARRQAGRSVSQIEHKGIVLDPAAHTVTIHNTPVNLSQKEFGILNF
LMNNIGKVVSKARIEEALYSWGSEIESNTVEVHIHHLRKKLGSDYIRTVRGVGYILDEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_004915459.1 transcriptional regulatory protein QseB BAC0487 Protein 4e-36 49
qseB YP_004915459.1 transcriptional regulatory protein QseB NC_002516.2.879194.p Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_004915459.1 transcriptional regulatory protein QseB VFG0473 Protein 6e-36 44