|
Name : kdsB (MEALZ_1558) Accession : YP_004916840.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 1773614 - 1774381 bp Length : 768 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme DNA sequence : ATGAGTATTCCGTTCAAAGTCGTGATTCCGGCCCGCTACGGATCGACTCGGCTGCCGGGCAAGCCGTTGCTGACTATCGC CGGAAAACCGATGATCGCGCATGTCTGCGAACGGGCAAGAGAAGCCGATGCCGAAGAAATCGTCGTGGCAACCGACGATG CGAGGATTTTCGATAAAGTGTTGGAACTCGGTATTCAAGCCGTGATGACTCGCGGAGATCATCAAAGCGGGACCGAACGT ATCGCGGAAGTCGCCGAGTTATGCGGATGGAGCGATGATACGATTATCGTCAATCTGCAAGGCGACGAACCGTTGATTCC GCCGGATTATATCCGGGATGCTGCGGAAGCATTGGCGGGTCAGCATCGTGCAGGTATTGCAACGCTTGCGGCACGCATTA CCGATCCGGAAGAAATCTTCAATCCCAACTCCGTCAAAACGGTGCTGAATAAGAACGGTTATGCGCTTTATTTCAGTCGT GCGCCGATTCCGTGGGACCGCGATCATTTCAGTCGGCAGGGCAGGGACTTTTCCGGAAAAATCGATTATTTGCGCCATAT CGGCATGTATGCGTACCGCGTCGATTTCTTGCGGCGTTATTGCGGTTGGGAAGCTTCACCGCTTGAGGCGGTCGAGTCAT TGGAGCAGCTTCGAATACTCTGGCACGGCGAGTCGATTCTCGTTAACACCGTCGCCAAAACTCCGGAAGCCGGTGTCGAT ACCGAGGACGATTTAAAACGCGTGGAAAGGGTTTTAGGTGAAAGGTGA Protein sequence : MSIPFKVVIPARYGSTRLPGKPLLTIAGKPMIAHVCERAREADAEEIVVATDDARIFDKVLELGIQAVMTRGDHQSGTER IAEVAELCGWSDDTIIVNLQGDEPLIPPDYIRDAAEALAGQHRAGIATLAARITDPEEIFNPNSVKTVLNKNGYALYFSR APIPWDRDHFSRQGRDFSGKIDYLRHIGMYAYRVDFLRRYCGWEASPLEAVESLEQLRILWHGESILVNTVAKTPEAGVD TEDDLKRVERVLGER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 7e-38 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-38 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-38 | 45 |
