Gene Information

Name : kdsB (MEALZ_1558)
Accession : YP_004916840.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 1773614 - 1774381 bp
Length : 768 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme

DNA sequence :
ATGAGTATTCCGTTCAAAGTCGTGATTCCGGCCCGCTACGGATCGACTCGGCTGCCGGGCAAGCCGTTGCTGACTATCGC
CGGAAAACCGATGATCGCGCATGTCTGCGAACGGGCAAGAGAAGCCGATGCCGAAGAAATCGTCGTGGCAACCGACGATG
CGAGGATTTTCGATAAAGTGTTGGAACTCGGTATTCAAGCCGTGATGACTCGCGGAGATCATCAAAGCGGGACCGAACGT
ATCGCGGAAGTCGCCGAGTTATGCGGATGGAGCGATGATACGATTATCGTCAATCTGCAAGGCGACGAACCGTTGATTCC
GCCGGATTATATCCGGGATGCTGCGGAAGCATTGGCGGGTCAGCATCGTGCAGGTATTGCAACGCTTGCGGCACGCATTA
CCGATCCGGAAGAAATCTTCAATCCCAACTCCGTCAAAACGGTGCTGAATAAGAACGGTTATGCGCTTTATTTCAGTCGT
GCGCCGATTCCGTGGGACCGCGATCATTTCAGTCGGCAGGGCAGGGACTTTTCCGGAAAAATCGATTATTTGCGCCATAT
CGGCATGTATGCGTACCGCGTCGATTTCTTGCGGCGTTATTGCGGTTGGGAAGCTTCACCGCTTGAGGCGGTCGAGTCAT
TGGAGCAGCTTCGAATACTCTGGCACGGCGAGTCGATTCTCGTTAACACCGTCGCCAAAACTCCGGAAGCCGGTGTCGAT
ACCGAGGACGATTTAAAACGCGTGGAAAGGGTTTTAGGTGAAAGGTGA

Protein sequence :
MSIPFKVVIPARYGSTRLPGKPLLTIAGKPMIAHVCERAREADAEEIVVATDDARIFDKVLELGIQAVMTRGDHQSGTER
IAEVAELCGWSDDTIIVNLQGDEPLIPPDYIRDAAEALAGQHRAGIATLAARITDPEEIFNPNSVKTVLNKNGYALYFSR
APIPWDRDHFSRQGRDFSGKIDYLRHIGMYAYRVDFLRRYCGWEASPLEAVESLEQLRILWHGESILVNTVAKTPEAGVD
TEDDLKRVERVLGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-38 45
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 7e-38 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 5e-38 45