Gene Information

Name : gacA (MEALZ_1370)
Accession : YP_004916653.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : response regulator gacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1541039 - 1541680 bp
Length : 642 bp
Strand : +
Note : -

DNA sequence : 
ATGATAAAAGTTTTGCTTGTTGATGATCATGAAATTGTTCGTTCCGGAGTTGAAGCGCTTTTAAATAAAGCCGGTGATAT
TCAGGTTGTGGCGGTGGCAAAAACCGGTGAGGAGAGCGTCGAGGCGGTGACGGAGTTGCATCCTGATGTGGTAGTCATGG
ATATCAGCATGCCGGGCATTGGCGGCGTTGAAGCTTGTCGGCGAATTCTGCAAGATAATCCGGATATGAAGATTATTGTG
CTGTCTGTTTGTAACGACGGACCGATACCGCTGCAGCTTTTGAAAATGGGGGTGTTAGGCTTTATTTCCAAAAGTTCGCC
AGTCGATGAAATGGTCGCCGCGATTCGAAAAATTATGGCCGGGCAGCGTTATTTATGCGCGGAGGTAGCTAACAATTTAG
CATTCATGAAGTTGCCCGGTAATAATTCTCCTTTCTCAAAGCTTTCCCAAAGGGAATCGGAAGTGGTTTCGTTAATTCTG
CAAGGCAAAACGATAAAAGAAATGTCGGGTATGCTGACGCTTAGCGATAAAACGATTAACACTTACCGCTATCGGCTTTA
CGATAAATTAAAAGTGAAGAACGATGTCGAATTAACGCGGCTTGCCATCAAATTCGATTATATCGATTCCGCATCGATTT
AA

Protein sequence : 
MIKVLLVDDHEIVRSGVEALLNKAGDIQVVAVAKTGEESVEAVTELHPDVVVMDISMPGIGGVEACRRILQDNPDMKIIV
LSVCNDGPIPLQLLKMGVLGFISKSSPVDEMVAAIRKIMAGQRYLCAEVANNLAFMKLPGNNSPFSKLSQRESEVVSLIL
QGKTIKEMSGMLTLSDKTINTYRYRLYDKLKVKNDVELTRLAIKFDYIDSASI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-45 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_004916653.1 response regulator gacA VFG1889 Protein 2e-44 46