Gene Information

Name : mutS (MEALZ_1132)
Accession : YP_004916417.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1279525 - 1282092 bp
Length : 2568 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1938937, 8244942; Product type e : enzyme

DNA sequence :
ATGAGTATAAAACAAACCAGCAACCAACACACCCCGATGATGCAGCAATATCTGCGCATCAAGGCCGACCATCCCGACAC
GCTCGTTTTTTACCGGATGGGCGATTTTTATGAACTTTTTTTCGACGATGCCAAAAAAGCCGCTCAGATTCTCGATATTA
CGCTGACGCAGCGCGGCCAGTCGGCCGGTGAGCCGATTCCGATGGCCGGCATTCCGTATCATGCCGCCGAAGGCTACATC
GCAAAATTGTTGCGCCACAGCGAATCGGTCGCGATTTGCGAACAAATCGGCGATCCGGCGACTTCGAAAGGACCGGTCGA
TCGCAAAGTGGTGCGCATCGTCACACCCGGCACCGTTACCGACGAAGCCCTGCTCGAGGACCGTAAGGATAATTTGCTGG
TGGCGCTGCATGTTGCCGATTCCAAATTCGGTATCGCCGCTTTAGATGTGACCAGCGGACGCTTTGTATTGCAACAACTG
GATTCGGCCGATACGATGTTGAGCGAAATCGAACGTCTGGACCCGGCCGAGCTATTGGTCAGCGAAGATATCGCTCTTCT
ACAGGCTTTGAAGCAGCGCAAAGGCATTTGTAAGCGCCCGCCTTGGCATTTCGAGCCTGACAGTGCGCGTCAACTGGTAT
TGAATCAATTCAACACGCACGATCTATCAGGCTTCGGTTGCGAAAATATGCCGATCGCTATTGCCGCGGCCGGCTGTCTG
TTGCAATACGTCAAAGACACGCAGCAAAGCGCCCTGCCCCATATTCAAGGCATTCGGGTCGAAAACAATTCCGAGGGCAT
TCAACTCGATGCCGCGAGCCGCCGCAATCTGGAACTGGACACGCATCCGACCGGCGAGCTGCGCTACACCTTATTCGGCG
TACTCGACAAAACCGTCACAGCGATGGGCAGTCGTTGTCTGCGCCGCTGGATCAACCGGCCGCTCAGAGACCAAGCCATT
CTGCAAAACCGATATTCGGCAATCGAATCGCTATTGTCCGAACGGCTTTTAGATGCTGTTCGCAATCAATTAAATGCGGT
CGGCGACATCGAGCGTATCAGCTCACGAATCGCACTCAAATCGGCCAGGCCGCGCGATTTGATCGTGTTACGCAATACCC
TGGCCGTTTTACCGACATTGCAGCCCTTGCTATCGAATACCGACAGTCCGGAGCTGATGCGCCTGGCCAAGCAACTCACC
GAACAACCCGAGTTATCTGAGCTGTTGCAACGAGCCATTATCGACAACCCGCCTGTTCTAATTCGCGACGGCGGCGTCAT
TGCCCCCGGTTACCATGCCGAACTCGATGAACTGCGCAACTTAAGCCGCAATGCCGATCAATTTCTGCTCGATATGGAGG
AGCGAGAAAAGGCTGCGACCGGCATTAGCGGCCTAAAAGTCAATTACAACCGCGTGCATGGTTACTATATCGAGGTTTCA
AGATTACATGCCGAGAAAGTTCCGGCACACTACCACCGTAAACAAACGCTGAAAGGCGTCGAGCGCTACATTACCGAGGA
ATTAAAAACCTTCGAAGATAAAGTTCTGAGTGCGAAAGAAAAATCGCTGGCCTTCGAAAAATCACTATACGATCAATTGC
TGAACAAGCTCGGCGAGTCATTAATTGATCTGCAGCAATGCGCGCAAGGACTCGCCGAACTGGATGTGCTGGCGGCATTT
GCCGAACGCGCCGAAACATTGAATTTGACTCGCCCGCAATTGACCGATAAGCCCGGCATCGATATCGAAGGCGGACGGCA
TCCGGTCGTCGAGCAAGTCTCCGACATTCCGTTTGTCGCAAACGATCTTAAACTATCGCCTCAGCGCCGCATGCTCATCA
TCACCGGCCCGAATATGGGCGGTAAATCGACTTATATGCGCCAGGCGGCCTTGATCGTGTTGATCGCGCATATCGGCTGT
TATGTTCCGGCCAAGGCCGCAACGATCGGCCCGGTCGATAAGATTTTCACCCGCATCGGCGCTTCAGACGACTTGGCCGG
CGGACGTTCGACTTTCATGGTTGAAATGTCGGAAACTGCCAATATTCTGCATAACGCAACCGAACAAAGCTTGATATTGA
TGGACGAAATCGGCCGCGGCACCAGCACTTTTGACGGCTTGTCTTTGGCTTGGGCTTGCGCCGATCATTTAGCAAAAGTC
ACAAAGGCTTATACGTTATTCGCGACGCATTATTTCGAGTTGACGACTCTAGCGGACGAGCAAAAACCGATCCATAACGT
GCATCTCGACGCAATGGAGTACGGCGACAAAATCGTGTTTCTGCATGCGGTCAAGGAAGGTCCGGCGAGCCAAAGTTACG
GGCTGCAAGTCGCCTCACTGGCTGGTGTTCCGGCAACAGTGATAGACAAAGCCAAATTGAAATTGCAGCATCTCGAAAAC
AACACTTATTATCAAAACCAGACCGAATCGGGCAATCAGCAATTGGATTTATTCGCGACCCAAGAGTGCCATCCGGCAGT
CTGTTTGATCGAGGAGTTAGACCCGGACAACTTGAGCCCGAGGCAAGCTTTGGATACGCTTTATCGTTTAAAAAAGATGG
TGGAGTAA

Protein sequence :
MSIKQTSNQHTPMMQQYLRIKADHPDTLVFYRMGDFYELFFDDAKKAAQILDITLTQRGQSAGEPIPMAGIPYHAAEGYI
AKLLRHSESVAICEQIGDPATSKGPVDRKVVRIVTPGTVTDEALLEDRKDNLLVALHVADSKFGIAALDVTSGRFVLQQL
DSADTMLSEIERLDPAELLVSEDIALLQALKQRKGICKRPPWHFEPDSARQLVLNQFNTHDLSGFGCENMPIAIAAAGCL
LQYVKDTQQSALPHIQGIRVENNSEGIQLDAASRRNLELDTHPTGELRYTLFGVLDKTVTAMGSRCLRRWINRPLRDQAI
LQNRYSAIESLLSERLLDAVRNQLNAVGDIERISSRIALKSARPRDLIVLRNTLAVLPTLQPLLSNTDSPELMRLAKQLT
EQPELSELLQRAIIDNPPVLIRDGGVIAPGYHAELDELRNLSRNADQFLLDMEEREKAATGISGLKVNYNRVHGYYIEVS
RLHAEKVPAHYHRKQTLKGVERYITEELKTFEDKVLSAKEKSLAFEKSLYDQLLNKLGESLIDLQQCAQGLAELDVLAAF
AERAETLNLTRPQLTDKPGIDIEGGRHPVVEQVSDIPFVANDLKLSPQRRMLIITGPNMGGKSTYMRQAALIVLIAHIGC
YVPAKAATIGPVDKIFTRIGASDDLAGGRSTFMVEMSETANILHNATEQSLILMDEIGRGTSTFDGLSLAWACADHLAKV
TKAYTLFATHYFELTTLADEQKPIHNVHLDAMEYGDKIVFLHAVKEGPASQSYGLQVASLAGVPATVIDKAKLKLQHLEN
NTYYQNQTESGNQQLDLFATQECHPAVCLIEELDPDNLSPRQALDTLYRLKKMVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_004916417.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 60