Gene Information

Name : ribD (SCAT_5370)
Accession : YP_004914861.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_016111
Putative virulence/resistance : Unknown
Product : fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 5786707 - 5787828 bp
Length : 1122 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9068650; Product type e : enzyme

DNA sequence :
GTGGCCACCCCCGTCGAAACCGACGCCATGCGGCGCGCCGTCGCGCTGGCCGCGCGCGGACTCGGCCACACCAGCCCCAA
CCCGGTCGTCGGGTGCGTCGTGCTCGACGCCGACGGGCGGGTGGCCGGCGAGGGCTGGCACCGGCGGGCCGGCGGCCCGC
ACGCCGAGGTCCACGCGCTGCGCGAGGCCGGCGACCGGGCCCGGGGCGGCACCGCCGTCGTCACCCTCGAACCGTGCGAC
CACACCGGCCGCACCGGACCGTGCTCCCAGGCCCTGATCGACGCCGGGATCCGCCGCGTGGTGCACGCCGTCGCCGACCC
GGACCCGACCGCCTCCGGCGGCGCCGGACGGCTGCGCGCCGCCGGGATCGACGTCGAGGCCGGACTGCTGGCCGCCGAGG
CCGCCCGCGGCAACGAGGCGTGGCTGGCCTCGGTACGCCACCGCCGCCCCTTCGTCACCTGGAAGTACGCCGCCACCCTG
GACGGCCGGAGCGCCGCCGCCGACGGCACCAGCCGCTGGATCACCTCCGACGCCGCCCGCGCCGAGGTGCACCGGCTGCG
AGCCGAGGCCGACGCGGTGCTCGTCGGCTCCGGCACCCTGCGCGCCGACGACCCGCACCTGGCCGTCCGCGGAGTGCCCG
GCGAGGTCACCCAGCCGCTGCGGGTCGTGGTGGACACCGAGGCCACCGTGGAGCCCGGCGCCCGGGTCCTCGACGACGCC
GCGCCCACCCTGATCGCGGTGGCCGAGGACGCCGACGCCGGCCACCTGGGGGCCAGGGCGCTGCGGCTGCCGCGCGCCGC
CACCGGCCCCGGCCTGGACATCCCCGCCCTGCTCACCGCCCTCCACCAGCGCGACGTCCGCTCCGTGCTGCTGGAAGGCG
GCCCCACGCTCGCCGGTGCCTTCCTCGCCGCGGACGCGGTCGACAAGGTCGTCGGCTACCTGGCCCCCACCCTGCTCGGC
GCCGGCCCGGCCGCGCTCGCCGACGCGGGCGTCCGCACCATCGCGCAGGCCCTCCGCCTGGACCTGGCCGAAGCCGTCCG
GGTCGGCCCCGACCTGCGCGTCACCGCCTACCCACGCCGTCCCGGTGGGCCCAGCCCCGCCGCCACCGCCGAGGAGAACT
GA

Protein sequence :
MATPVETDAMRRAVALAARGLGHTSPNPVVGCVVLDADGRVAGEGWHRRAGGPHAEVHALREAGDRARGGTAVVTLEPCD
HTGRTGPCSQALIDAGIRRVVHAVADPDPTASGGAGRLRAAGIDVEAGLLAAEAARGNEAWLASVRHRRPFVTWKYAATL
DGRSAAADGTSRWITSDAARAEVHRLRAEADAVLVGSGTLRADDPHLAVRGVPGEVTQPLRVVVDTEATVEPGARVLDDA
APTLIAVAEDADAGHLGARALRLPRAATGPGLDIPALLTALHQRDVRSVLLEGGPTLAGAFLAADAVDKVVGYLAPTLLG
AGPAALADAGVRTIAQALRLDLAEAVRVGPDLRVTAYPRRPGGPSPAATAEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-35 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-35 41