Gene Information

Name : rplS (SCAT_4437)
Accession : YP_004913936.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_016111
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 4759240 - 4759590 bp
Length : 351 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12682299, 16272117; Product type f : factor

DNA sequence :
ATGTCGAACCTGCTCGACGTCGTCGACTCCGCCTCCAAGCGCGACGACATCCCGGCCTTCCGCCCGGGTGACACCGTCAA
CGTCCACGTCCGGGTCATCGAGGGCAACCGCTCCCGGGTCCAGCAGTTCAAGGGCGTCGTCATCCGCCGCCAGGGCTCCG
GCATCCGCGAGACCTTCACCGTCCGCAAGGTCAGCTTCAGCGTCGGCGTGGAGCGGACCTTCCCGGTGCACACCCCGATC
GTGGAGAAGATCGAGGTCGTCACCCGCGGTGACGTGCGTCGCGCCAAGCTGTACTACCTGCGCGAGCTGCGCGGCAAGGC
CGCCAAGATCAAGGAGAAGCGGGAGAACTGA

Protein sequence :
MSNLLDVVDSASKRDDIPAFRPGDTVNVHVRVIEGNRSRVQQFKGVVIRRQGSGIRETFTVRKVSFSVGVERTFPVHTPI
VEKIEVVTRGDVRRAKLYYLRELRGKAAKIKEKREN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 5e-34 66
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-27 51