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Name : clpC (SCAT_4152) Accession : YP_004913651.1 Strain : Streptomyces cattleya NRRL 8057 Genome accession: NC_016111 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4444243 - 4446720 bp Length : 2478 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12354604, 15529410, 16525504; Product type f : factor DNA sequence : ATGCTGCCCGGTTCTCCGGAAAACCCTCTGAACGACCCGTTCGCCGAGTTGCTCGGCCGGTTCCTGGGGCTGACCCCGCG TTCGGCGCCGCCGGCGGTGCAGCGGGTGCCGATCGGGCGGTTGCTGAGCGATTCGGCGCGTGAGTTGTTGTCGCTGGCGG CCCGGCGGGCCGCCGAGGACGGCAGTGCCGACCTGGACACCGACCATCTGCTGTGGGCGGCCACCCAGCTGGAACCGGTC CGCGCGGTGCTCGCCGAGGCGGGAGCCGACCCGGACCGGATCGCCGAGGAGCTGACCCGCGTCCTGCCCTCCGGCGACCT GGAGCCGGCGGCCAACCCCCAGCTCACCCCGGCCGCCAAGCGCACGCTGCTGGCCGCGCACGCCGCCGCGCAGGCCACCG GCAGCTCCTACATCGGGCCCCAGCACATCCTCCAGGCCCTGGTGGAGCAGCCCGGCAGCGCCGCCGCGCAGGCGCTCGGC TCCCAGCTCGACCAGGGGAGTCGGCGCGAGCTGGGCCGGGCGGCCGGGGCCGGGGCCGGAAAGCCGCCGAGCGACACCCC GACCCTGGACGAGTACGGGCGCGACCTGACCGAGGAGGCCAGGGCGGGACGGCTGGACCCGGTGGTCGGACGGGCCGACG AGATCGAGCAGACCGTCGAGGTGCTCTCCCGGCGGACCAAGAACAACCCCGCCCTCATCGGCGAACCCGGCGTCGGCAAG ACCGCCATCGTCGAGGGGCTGGCCCAGCGCGTGGTCTCCGGCGACGTCCCCGCGCCGCTGGCCGGCAAGCGGGTGGTCGC CCTCGACCTGGTCGGCATGGTGGCCGGGGCCAAGTACCGCGGGGAGTTCGAGGAACGCGTCAAGAAGGTGCTGGAGGAGG TGGAGGCCGCCGAGGGCGGACTGATCCTGTTCGTCGACGAACTCCACACCGTCGTCGGCGCCGGCGGCACCGGCGAGGGC TCGATGGACGCCGGCAACATCCTCAAGCCCGCCCTCGCCCGCGGCGAACTCCATCTGATCGGCGCCACCACCATCGACGA GTACCGGCGCCACGTGGAGAAGGACCCGGCGCTGGAACGCCGCTTCCAGCCGGTGCTGGTCCGCGAGCCCACCGTCGAGG AGACGGTGCAGATCCTGGAGGGGCTGCGGGACGCCTACGAGGCCCACCACCAGGTACGTTTCCAGGACGAGGCGCTCACC GCGGCGGCCGAGCTCTCCGACCGCTACCTCACCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGGTCGACCAGGCCGG CGCCCGGGTACGGCTGCGTTCCATGGGGCGCAGCACCGAGGCGGTGGAGATCGAGGACCGGCTGACCAAGCTGCGCCGGG AGAAGGACGAGGCGGTGGCCGCCGAGGACTACCCGCGCGCCGACCGGCTCAAGGGCTGGATCACCCGGGCCGAGGAGGAG CTGGCCCGGCTCGGCGAGCGGCGCGAGGGCGTCGCCGCGGTCACCGCCGCCGACATCGCCGCCATCGTCGCCGCCCGCAC CGGCATCCCGGTGGACAAGCTCACCGCCACCGAACGCGAACGGCTGCTGAAGCTGGAGGACGCCCTCCACCAGCGGGTGG TCGGCCAGGACGAGGCGGTCACCGCGGTCGCCGAGGCGGTGCGCCGCAACCGGGCCGGGCTCGGCGACCCCGACCGCCCG GTGGGCTCCTTCCTCTTCCTCGGCCCGACCGGGGTGGGCAAGACCGAACTGGCCAAGGCGCTGGCCGAGTTGCTCTTCGG CGACGAGGACCGGCTGATCCGGTTCGACATGAGCGAGTTCCAGGAGCGCCACACCGTCAGCCGGCTGGTGGGCGCGCCGC CCGGGTACGTCGGCCACGAGGAGGCCGGGCAGCTCACCGAGGCGGTGCGCCGCAAGCCCTACAGCGTCCTGCTCTTCGAC GAGGTGGAGAAGGCCCACGCGGACGTCTTCAACCTGCTGCTCCAGGTGCTCGACGACGGCCGGCTCACCGACGCCCAGGG CCGCACCGTGGACTTCCGCAACACCGTGGTCATCATGACCAGCAACATCGGCGCCCAGCGCATCCAGGGGCTGGCCGACC GTCCGCTGACCGAGATCCGCGACGCCCTCCAGCCGGAGCTGCGGGCCTACTTCCGGCCGGAGTTCCTCAACCGGATCGAC GACATCATCGTCTTCCACCCGCTCAGCCGGGAGAACCTGGCGGTCGTCGTCGACCTGATGCTGGACCGCAGCCGCCGCCG GCTGCGCGCCCAGGACCTGGACCTGGAGCTGACCGACGAGGCCAGGCAGTGGCTGGCCGACATGGGCTACCAGCCGGAGT TCGGCGCCCGGCCGCTGCGCCGGGTGATCCAGTCCGAGCTGGACAACCGGGTGGCGAGCCTGCTGCTGGAGGGGGCCGCC GAACCCGGTGACACCGTCGTGGCCGAGGTGGCCGACGGCGAGCTGTCCTGCACGGTGCGGCGGAAGGAGAGCGCCTGA Protein sequence : MLPGSPENPLNDPFAELLGRFLGLTPRSAPPAVQRVPIGRLLSDSARELLSLAARRAAEDGSADLDTDHLLWAATQLEPV RAVLAEAGADPDRIAEELTRVLPSGDLEPAANPQLTPAAKRTLLAAHAAAQATGSSYIGPQHILQALVEQPGSAAAQALG SQLDQGSRRELGRAAGAGAGKPPSDTPTLDEYGRDLTEEARAGRLDPVVGRADEIEQTVEVLSRRTKNNPALIGEPGVGK TAIVEGLAQRVVSGDVPAPLAGKRVVALDLVGMVAGAKYRGEFEERVKKVLEEVEAAEGGLILFVDELHTVVGAGGTGEG SMDAGNILKPALARGELHLIGATTIDEYRRHVEKDPALERRFQPVLVREPTVEETVQILEGLRDAYEAHHQVRFQDEALT AAAELSDRYLTDRFLPDKAIDLVDQAGARVRLRSMGRSTEAVEIEDRLTKLRREKDEAVAAEDYPRADRLKGWITRAEEE LARLGERREGVAAVTAADIAAIVAARTGIPVDKLTATERERLLKLEDALHQRVVGQDEAVTAVAEAVRRNRAGLGDPDRP VGSFLFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRKPYSVLLFD EVEKAHADVFNLLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNIGAQRIQGLADRPLTEIRDALQPELRAYFRPEFLNRID DIIVFHPLSRENLAVVVDLMLDRSRRRLRAQDLDLELTDEARQWLADMGYQPEFGARPLRRVIQSELDNRVASLLLEGAA EPGDTVVAEVADGELSCTVRRKESA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-143 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004913651.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0079 | Protein | 1e-156 | 52 |
| clpC | YP_004913651.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0080 | Protein | 4e-135 | 51 |
