Gene Information

Name : lolD (SCAT_3902)
Accession : YP_004913401.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_016111
Putative virulence/resistance : Virulence
Product : Lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4177428 - 4178108 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGCACCGCTGCTGCGCGCCACCGCGCTGGCCAAGTCCTACGGCCCCACCCGGGCGCTGGAGAACGCGGAGTTCTC
CCTCCGCGCCGGTGAGGTGGTCGCCGTGATGGGCCCCTCCGGCTCCGGCAAGTCCACGCTGTTGCACTGCCTGGCCGGGA
TCGTCCGCCCCGACGCCGGCCAGGTCTTCTACCGCGACCGGGAGCTGTCCGCGATGAGCGACGGCCAACGCAGCGCGCTG
CGCCGCGGGGAGTTCGGCTTCGTCTTCCAATTCGGCCAGCTCGTCCCGGAGTTGACCTGCCTGGAGAACGTGGCGCTACC
GCTGCGGCTGGCCGGGACCGGGCGCCGGGCCGCCGAGGAACGCTCCCGCGAGTGGCTGGCCCGGCTGGAGGTCGAGCAGG
TGACCGCCAAGCGCCCCGGCGAGGTCTCCGGCGGCCAGGGCCAGCGGGTCGCGGTGGCCAGGGCGCTGGTCACCGGCCCC
CGGCTGCTCTTCGCCGACGAACCCACCGGCGCCCTCGACTCGCTCAACGGAGAACGCGTGATGGGACTGCTGACCGCCGC
CGCCCGGGAGAACGGCACCGCCGTCGTCCTGGTCACCCACGAGGCCCGGGTCGCCGCGTACTCCGACCGCGAGGTCGTGG
TGCGCGACGGCCGCTGCCGGGATCTGGAGCCGGCCGCATGA

Protein sequence : 
MTAPLLRATALAKSYGPTRALENAEFSLRAGEVVAVMGPSGSGKSTLLHCLAGIVRPDAGQVFYRDRELSAMSDGQRSAL
RRGEFGFVFQFGQLVPELTCLENVALPLRLAGTGRRAAEERSREWLARLEVEQVTAKRPGEVSGGQGQRVAVARALVTGP
RLLFADEPTGALDSLNGERVMGLLTAAARENGTAVVLVTHEARVAAYSDREVVVRDGRCRDLEPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004913401.1 Lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 3e-28 45
lolD YP_004913401.1 Lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 4e-36 42
lolD YP_004913401.1 Lipoprotein-releasing system ATP-binding protein lolD CP001581.1.gene598.p Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004913401.1 Lipoprotein-releasing system ATP-binding protein lolD VFG2059 Protein 2e-22 43