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Name : clpC (SCAT_2618) Accession : YP_004912128.1 Strain : Streptomyces cattleya NRRL 8057 Genome accession: NC_016111 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2743327 - 2745795 bp Length : 2469 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12354604, 15529410, 16525504; Product type f : factor DNA sequence : ATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTGGGTCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGC CCTGGAGAGCCTCGGCATTTCGCTTGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGT CCGGCCACATCCCCTTCACCCCTCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGTGAGGCCCTCCAGCTCGGCCACAAC TACATCGGTACGGAGCACATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGTGGCCGCGCAGGTGCTGGTGAAGCTTGG CGCCGACCTCAACCGGGTGCGGCAGCAGGTCATCCAGCTCCTGTCGGGTTACCAGGGCGGCAAGGAGTCGGCCACGGCCG GCGGCCCCGCCGAGGGCACCCCGTCCACTTCCCTGGTGCTCGACCAGTTCGGCCGCAACCTGACGCAGGCCGCCCGCGAG ACCAAGCTCGACCCGGTGATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAA CCCCGTCCTCATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTGGTCGAGGGGCTGGCCCAGGCCATCGTCAAGGGCGAGG TCCCCGAGACGCTGAAGGACAAGCAGCTCTACACCCTCGACCTGGGCGCCCTGGTGGCCGGCTCCCGGTACCGCGGTGAC TTCGAGGAGCGCCTGAAGAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACAC CCTGGTGGGTGCGGGCGCCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTCGCCCGCGGTGAGCTCC AGACCATCGGCGCCACCACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCG ATCCAGGTCGCCGAGCCGTCGCTCCCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCCCACCACCG CGTCTCCATCACCGACGCGGCGCTGGTCGCGGCGGCCACCCTGGCCGACCGCTACATCTCCGACCGCTTCCTGCCGGACA AGGCGATCGACCTGATCGACGAGGCGGGCTCGCGGATGCGCATCCGCCGGATGACCGCCCCGCCGGACCTGCGCGAGTTC GACGAGAAGATCGCGGACGTGCGCCGGGAGAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCCGCGTCGCTGCG CGACAAGGAGAAGCAGCTCCTGGCCGCGAAGACCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCG AGGTGGACGAGGAGCTGATCGCCGAGGTCCTGGCGACCGCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCC TCGCGTCTGCTGCGCATGGAGGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCGCTCTCCCAGGC CATCCGGCGTACCCGGGCCGGCCTGAAGGACCCGAAGCGTCCCGGCGGTTCGTTCATCTTCGCCGGCCCCTCCGGCGTCG GTAAGACCGAGCTGTCCAAGACGCTGGCGGAGTTCCTCTTCGGCGACGAGGACGCGCTGATCCAGCTCGACATGTCGGAG TTCAGCGAGAAGCACACCGTCTCCCGGTTGTTCGGCTCGCCCCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCAC CGAGAAGGTGCGCCGCAAGCCGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGC TGTTGCAGATCCTGGAGGACGGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATG ACCACCAACCTCGGTACCCGGGACATCTCCAAGGGCTTCAACCTCGGCTTCGCCGCCGCGGGTGACGTCAAGACCGGGTA TGAGCGGATGAAGGCCAAGGTCGGCGAGGAGCTCAAGCAGCACTTCCGCCCCGAGTTCCTCAACCGTGTGGACGACATCG TGGTCTTCCACCAGCTCACCGAGGACGACATCATCCAGATCGTCGACCTGATGATCGCCCGCGTCGACGAGCGGCTGAAG GACCGGGACATGGGCATCGAGCTCAGCCCCGAGGCCAAGAAGCTGCTCGCCAAGAAGGGCTACGACCCGATCCTGGGCGC CCGGCCGCTGCGTCGGACGATCCAGCGCGAGATCGAGGACCAGCTCTCCGAGAAGATCCTCTTCAACGAACTGCGCCCCG GTCACATCGTGGTCGTCGGCACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGTGAGGAGAAGGTGACCGTC GCCGACGCCCCGCCCATCGAGGCGGCCGGCAGCGGCGGCAGTGGCCCCAACCTCTCCAAGGACGTCTGA Protein sequence : MLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHN YIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGGKESATAGGPAEGTPSTSLVLDQFGRNLTQAARE TKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRGD FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQP IQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREF DEKIADVRREKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDEELIAEVLATATGIPVFKLTEEES SRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQLDMSE FSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIM TTNLGTRDISKGFNLGFAAAGDVKTGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLTEDDIIQIVDLMIARVDERLK DRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKILFNELRPGHIVVVGTEGEGEEKKFTFRGEEKVTV ADAPPIEAAGSGGSGPNLSKDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 76 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004912128.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0079 | Protein | 0.0 | 62 |
| clpC | YP_004912128.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0080 | Protein | 1e-149 | 52 |
