Gene Information

Name : SCAT_2104 (SCAT_2104)
Accession : YP_004911620.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_016111
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2231771 - 2232640 bp
Length : 870 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
GTGACCACGACCGCCCCTTCCGGTTCCCCGGCCGACGACCGTTCCCCGGCATCCGGCTCCGTCGGCGGCCCGCTCGCGGT
GGCCGCCCGCGCGACCGAGCTGACCAAGGTGTACGGCCAGGGCGAGACCCGGGTGGTCGCCCTCGACGGGGTCTCCACCG
CGTTCCACCGCGGCCGGTTCACCGCCATCATGGGCCCCTCCGGCTCCGGCAAGTCGACCCTGATGCACTGCATGGCCGGG
CTCGACACGGTCTCCGCCGGGTCGGCGCGGATAGGTGACACCGAACTGTCCTCGCTCAAGGACAAGCAGCTCACCCGGTT
GCGCCGGGACAAGGTGGGCTTCATCTTCCAGGCGTTCAACCTGCTGCCCACGCTGACCGCGCTGGAGAACATCACGCTGC
CGATGGACATCGCCGGCCGCAAGCCCGACAAGGCGTGGCTGGACCAGGTGATCCGCACCGTGGGCCTGTCCGGCCGCCTG
TCCCACCGCCCCGCCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCGGTGGCCCGTGCCCTGGCCGCCCGTCCGGAGAT
CATCTTCGCCGACGAACCGACGGGTAACCTCGATTCCCGCTCCGGCGCCGAGGTCCTCGGCTTCCTGCGCAACTCGGTGC
GCGAACTCGGCCAGACCGTCGTGATGGTCACCCACGACCCGGTGGCCGCCTCCTACGCGGACCGGGTGATCTTCCTCGCC
GACGGCCGCATCGTGGACGAGATGCACGCGCCCACCGCCGAAGGCGTCCTGGAGCGGATGCGGCTCTTCCCGGCCGCCGG
CCCGGCCGCCACCCCGGACCCCACGGGCGCCCCGGCCGCCCCGCGCGGCGCCGGCGCCCACGCCCGCTGA

Protein sequence :
MTTTAPSGSPADDRSPASGSVGGPLAVAARATELTKVYGQGETRVVALDGVSTAFHRGRFTAIMGPSGSGKSTLMHCMAG
LDTVSAGSARIGDTELSSLKDKQLTRLRRDKVGFIFQAFNLLPTLTALENITLPMDIAGRKPDKAWLDQVIRTVGLSGRL
SHRPAQLSGGQQQRVAVARALAARPEIIFADEPTGNLDSRSGAEVLGFLRNSVRELGQTVVMVTHDPVAASYADRVIFLA
DGRIVDEMHAPTAEGVLERMRLFPAAGPAATPDPTGAPAAPRGAGAHAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAT_2104 YP_004911620.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-44 47
SCAT_2104 YP_004911620.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 47
SCAT_2104 YP_004911620.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-35 43
SCAT_2104 YP_004911620.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-32 41
SCAT_2104 YP_004911620.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-29 41