Gene Information

Name : regX (SCAT_2073)
Accession : YP_004911589.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_016111
Putative virulence/resistance : Virulence
Product : Sensory transduction protein regX3
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2197740 - 2198411 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCGCGTACTGCTCGCCGAGGACGACGCCTCCATCTCGGAACCGCTCGCACGCGCACTGCGCCGCGAAGGATACGA
CGTGGAGGTGCGCGAAGACGGACCGACCGCGCTCGACGCCGGGCTCCAGGGCAGCGTGGACCTGCTCGTGCTGGACCTCG
GCCTGCCCGGGATGGACGGCCTGGAGGTGTGCCGCCGGCTGCGCACCGAGGGCCACGGCTTCCCGGTGCTCGTCCTCACC
GCCCGGGCCGACGAGGTGGACACGGTGGTCGGCCTCGACGCCGGCGCCGACGACTACGTCACCAAGCCCTTCCGCCTCGC
CGAACTGCTCGCCCGGGTGCGGGCCCTGCTGCGCCGCGGCAGCGCCGAGTCGCAGCCGGCCACCCAGGGCGTGCGCATCG
ACGTCGAGTCGCACCGGGCGTGGATCGGCGACGACGAACTGTCGCTGACCGCCAAGGAGTTCGACCTGCTGCGGGTCCTG
GTGCGGGACGCCGGCCGGGTGGTCACCCGCGACCAGCTGATGCGCGAGGTGTGGGACACCACCTGGTGGTCCTCGACCAA
GACGCTCGACATGCACATCTCCTGGCTGCGCAAGAAGCTCGGCGACGACGCCGCCAACCCGCGGTACATCTCCACCGTGC
GCGGCGTCGGCTTCCGCTTCGAGAAGAACTGA

Protein sequence : 
MTRVLLAEDDASISEPLARALRREGYDVEVREDGPTALDAGLQGSVDLLVLDLGLPGMDGLEVCRRLRTEGHGFPVLVLT
ARADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGSAESQPATQGVRIDVESHRAWIGDDELSLTAKEFDLLRVL
VRDAGRVVTRDQLMREVWDTTWWSSTKTLDMHISWLRKKLGDDAANPRYISTVRGVGFRFEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-14 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX YP_004911589.1 Sensory transduction protein regX3 AE000516.2.gene3505. Protein 2e-30 46
regX YP_004911589.1 Sensory transduction protein regX3 BAC0083 Protein 2e-20 44
regX YP_004911589.1 Sensory transduction protein regX3 BAC0197 Protein 7e-17 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX YP_004911589.1 Sensory transduction protein regX3 VFG1390 Protein 2e-28 45
regX YP_004911589.1 Sensory transduction protein regX3 VFG0473 Protein 1e-17 43
regX YP_004911589.1 Sensory transduction protein regX3 VFG0596 Protein 4e-15 42
regX YP_004911589.1 Sensory transduction protein regX3 VFG1389 Protein 2e-22 41