Gene Information

Name : Sfla_6480 (Sfla_6480)
Accession : YP_004909408.1
Strain :
Genome accession: NC_016110
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 31321 - 31638 bp
Length : 318 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: rop:ROP_pROB01-04670 putative transposase orfA for insertion sequence element

DNA sequence :
ATGGCTGCTCCCCGTAAGTACCCCGATGAACTGCGTGAGCGCGCAACACGTCTGGCGATCGAGGCCCGCAAGGACCCGGT
CGGCCGGGCCGGCGCGATCAAGCGCATCGCCGACCAGCTGGACGTGCACCCCGAGGCCCTGCGGGGGTGGGTCAAGCGGG
CCGAGACCGACGAGGGACTCGTACCCGGCACCACCAGTGCCGAGGCCGCCCGGATCGCCGAGCTGGAGCGGGAGGTGAAG
GAACTGCGGCGGGCGAACGCGATATTGAAGTCCGCCTCGGCTTTCTTCGCGGCGGAGCTGGACCGTCCACTGCGATGA

Protein sequence :
MAAPRKYPDELRERATRLAIEARKDPVGRAGAIKRIADQLDVHPEALRGWVKRAETDEGLVPGTTSAEAARIAELEREVK
ELRRANAILKSASAFFAAELDRPLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-07 46
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-07 46
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-07 46
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 2e-08 45
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 2e-08 45
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 2e-08 45
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 1e-08 45
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 2e-08 45
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 1e-08 45
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 2e-08 45
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 1e-08 45
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 1e-08 45
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-05 44
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 2e-04 44
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-04 44
unnamed AAF09023.1 unknown Not tested SHI-O Protein 3e-06 43
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 3e-06 43
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 2e-06 43
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-06 43
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-06 43
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-06 43
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 2e-06 43
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 2e-06 43
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 4e-04 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_6480 YP_004909408.1 transposase IS3/IS911 family protein VFG1603 Protein 5e-06 44
Sfla_6480 YP_004909408.1 transposase IS3/IS911 family protein VFG0643 Protein 7e-07 43