Gene Information

Name : KSE_72970 (KSE_72970)
Accession : YP_004909008.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8293169 - 8294011 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence :
ATGTCGCCCCGCCTGCGCCGTTCCGCCTCCGGTCGGCCCGCCCCGTCAGCCGTCCCCGGATCCCCAAGGCCCGCCGGTCC
CGCCGGGCCCGCCACCGGGGTGCCCGCCGTGGAGCTGCGCGGGGTGCGCCGCGGCTACGGGCAGGGGGCGGGGGCGGTGA
CCGCGCTCGGGGGCGTCGACCTGGTGCTCCCGGCGGGCACCTTCACGGCCGTGATGGGTCCGTCCGGCTCCGGCAAGAGC
ACCTTCCTGCAGTGCGCGGCGGGCCTCGACCGGCCGGACGCCGGCCAGGTGCTGCTGGCCGGGCAGGAGATCAGCTCGCT
GGGCGAGGACCGGCTGACCAAGCTGCGGCGCACCCGGATCGGTTTCGTCTTCCAGTCCTTCAACCTGCTGCCGTCCCTGA
CCGTCCTGCAGAACGTGCTGCTGCCCCAGCGGCTGGCCGGCCAGCGGCAGGAGCGGGCCCGGGCCGGCGAACTGCTGGCC
CGGGTCGGCCTGGGCGAGCACGCCTCGCGCCGCCCCGGCCAGCTCTCCGGCGGTCAGCAGCAGCGCGTCGCGCTGGCCCG
CGCGCTGATCACCCGCCCCGACGTGATCTTCGCGGACGAGCCCACCGGCGCCCTCGACACCCGCAGCGCCCACGAGGTGC
TCGGCCTGCTGCGGGACGCGGTGGACGCCCTGGGCGCCACCGTCGTGATGGTCACCCACGACCCGGTGGCCGCCTCCTTC
GCCGACCGGGTGGTCTTCCTGGCCGGCGGCACCCTCGCCGGTGAACTCCACCACCCCGATCCGCGCACCGTGGCCGACCG
CATGCTCACCCTCTCCGCCTCCCCCTCGGGGGCCGCCGCATGA

Protein sequence :
MSPRLRRSASGRPAPSAVPGSPRPAGPAGPATGVPAVELRGVRRGYGQGAGAVTALGGVDLVLPAGTFTAVMGPSGSGKS
TFLQCAAGLDRPDAGQVLLAGQEISSLGEDRLTKLRRTRIGFVFQSFNLLPSLTVLQNVLLPQRLAGQRQERARAGELLA
RVGLGEHASRRPGQLSGGQQQRVALARALITRPDVIFADEPTGALDTRSAHEVLGLLRDAVDALGATVVMVTHDPVAASF
ADRVVFLAGGTLAGELHHPDPRTVADRMLTLSASPSGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-41 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-43 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-43 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-43 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-20 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-20 41
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_72970 YP_004909008.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-40 48
KSE_72970 YP_004909008.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-44 46
KSE_72970 YP_004909008.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-44 45
KSE_72970 YP_004909008.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-42 42