Gene Information

Name : KSE_06100 (KSE_06100)
Accession : YP_004902408.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative amino acid transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 676574 - 678061 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGACACACCCGCGCCCCAGGGCATCGAGAACTACGGCTACCGACAGGAGTTGCGCCGCTCCCTGACCTTCACCGA
CCTGCTCGTCTACGGGCTGGTCTTCATGGTGCCGATCGCGCCGTTCGGCATCTTCGGCAGCGTCTTCCAGGGCTCCGGCG
GGATGGTCGCGCTGGCGTACGTGCTGGGCATGGTGGCGATGATGTTCACCGCGCTGTCGTACGCCCAGATGTCGCGGGCG
TTCCCGATGGCGGGTTCGGTGTACACCTACGCGGGTCGCGGGATCGGCGCGCCGGTGGGCTTCCTGTCCGGCTGGATGAT
CCTGCTGGACTACGTGCTGGTGCCGAGCCTGCTGTACCTGATCGCCGGGGTGGCGATGAACTCGCTGGTGGCGTCGGTGC
CGGTGTGGCTCTGGGTGGTCGGGTTCGTGCTGCTGAACACGGCGGTCAACTACCTGGGCATCGAGACCACCGCCAAGGTC
AACAAGGCGGTGCTGGTCGGCGAACTGGTGGTGCTGGCGCTGTTCGTGGTGGTCGGCGTGGTGGCGCTGGCCGGCGGCAA
GGGCCGGGGCTTCGACTTCACGCCGCTGTACAACGGGCACACCTTCTCCTGGAGCCTGGTGTTCGGCGCGGTGTCGATCG
CGGTGCTGAGCTTCCTCGGCTTCGACGGCATCTCCACCCTCTCGGAGGAGAACCGGGATTCGGCGAAGGCGATCGGCCGG
TCGATGGTGGCCGCGCTGCTGCTGGCGGGCACGCTGTTCATCGTGCAGACCTGGATCGCGTCGCTGCTGGTCGCCGACCC
GGACGCGCTGGTGGCGGACGGCGATCCGGACGGCACCGCGTTCTACGACGCGGCGCGCACCGCGGCCGGCGGCTGGCTGG
CCACCCTGACCGCCGCCGCGACGGCCGTGGCCTGGGGCTTCGCCAACTCGCTGGTGGCCCAGGCGGCGACCAGCCGGCTG
CTGTTCGCGATGGCCCGCGACCGCCAGCTGCCGTCCTTCCTGGCGAAGGTCCACCCGACCCGCCGGGTGCCGGTCAACGC
GACCCTGCTGACCGCCGGCGTCTCGCTGGCGCTCGGCCTCTACATGACCTCCCGGGCGGACGGCATCACGCTGCTCAGCT
CGCTGGTCAACTTCGGCGCGCTGAGCACCTTCCTGGTGCTGCACGTCGCCGTGGTGGTGCACTACCTGGTCCGCAAGCGC
AGCCGGGACTACTGGCGGCACCTGGTCGCCCCGGTGCTGGGCTTCGCGATCCTGGCGTACGTGGTGGTCAACGCGAACAT
CGCGGCGCAGCGGCTCGGCTTCGTCTGGGTGCTGGTCGGCGCCCTGGTGCTGACCGGGCTGATCGCGACCGGCCGCAAGC
CGCAGCTGTCGGTGGCCGAGCCGATCGCCGCCGTCCCCGCCCAGGCTCCCGCGCCCGCGCCCGCGCCCGCCGAGGCTCCC
GCGCCCGCCGACTCCCCGACCGATTCCCCCGCCAAGGAGAACCCGTGA

Protein sequence :
MADTPAPQGIENYGYRQELRRSLTFTDLLVYGLVFMVPIAPFGIFGSVFQGSGGMVALAYVLGMVAMMFTALSYAQMSRA
FPMAGSVYTYAGRGIGAPVGFLSGWMILLDYVLVPSLLYLIAGVAMNSLVASVPVWLWVVGFVLLNTAVNYLGIETTAKV
NKAVLVGELVVLALFVVVGVVALAGGKGRGFDFTPLYNGHTFSWSLVFGAVSIAVLSFLGFDGISTLSEENRDSAKAIGR
SMVAALLLAGTLFIVQTWIASLLVADPDALVADGDPDGTAFYDAARTAAGGWLATLTAAATAVAWGFANSLVAQAATSRL
LFAMARDRQLPSFLAKVHPTRRVPVNATLLTAGVSLALGLYMTSRADGITLLSSLVNFGALSTFLVLHVAVVVHYLVRKR
SRDYWRHLVAPVLGFAILAYVVVNANIAAQRLGFVWVLVGALVLTGLIATGRKPQLSVAEPIAAVPAQAPAPAPAPAEAP
APADSPTDSPAKENP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 5e-62 41
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 5e-62 41
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 4e-62 41
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 4e-62 41
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 2e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_06100 YP_004902408.1 putative amino acid transporter VFG0480 Protein 2e-62 41