|
Name : clpC2 (KSE_61200) Accession : YP_004907842.1 Strain : Kitasatospora setae KM-6054 Genome accession: NC_016109 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6886219 - 6888708 bp Length : 2490 bp Strand : - Note : - DNA sequence : ATGACCATGCCCGGCTTCGGCTCCTTCGGTTCCGACGACGCCTTCTCCGACCTGCTGAACCGCTTCTTCGGCCTCAATCC GGCCGCGTCCCCGCCCGCCGTCCAGCGCGTCCCGATCGGGCGGCTGCTGACCGAGTCCGCCCGCGACCTGATCGCCCGCG CCGAGCTGCGCGCCCAGGAGGACGGCAGCACCGATCTGGACACCCCGCACCTGCTGTGGGCCGCCACCCGGGTCGACCCG TCCCGCGGCCTGCTCGCCCAGGCCGGCGCCGACCCGGACGAGCTGGCCGCCGCGCTGGAGCGCAGCCTGCCGTCCGGCTC GGCCGACCCGTCCGTCGACCCGGGCCTGACCCCGGCGGCCAAGCGGGTGCTGATCGGCGCGCACGCCCGCTCGCAGGCCG CCGGCGTCTCCTACATCGGGCCGGAGCACATCCTGGCCGCGCTGCTCGGCGACCCGGACTCCGCGGCCGGCCGGCTGCTG AACGCGCAGGGCGCCGACCCGGCCCGGCTCCAGCGCGGCGCCGAGGTCGCCGCCCGCGGCGAGCGCGCGCCCGCGAAGGC GGAGAGCCGGACGCCGACCCTGGACGAGTACGGCCGCGACCTCACCGAGGACGCCAAGCTCGGCCGGCTGGACCCGGTGG TCGGCCGGGCCGAGGAGATCGAGCAGACCGTCGAGATCCTGTCCCGCCGCTCCAAGAACAACCCGGTGCTGATCGGCGAG CCCGGCGTCGGCAAGACCGCGATCGTCGAGGGCCTGGCCCAGCGGATCGTCACCGGCGACGTGCCGTCCACCCTGAAGGA CCGGCGGGTGGTCTCGCTCGACCTGTCCGGCCTGGTGGCCGGCTCGAAGTACCGGGGCGAGTTCGAGGAGCGGCTGAAGA ACGTCATCGACGAGGTCCGCGAGGCCGCCGACTCCACCATCCTGTTCATCGACGAGCTGCACACCGTGGTCGGCGCGGGC GCCGGCGGCGAGGGCGCGATGGACGCGGGCAACATGCTCAAGCCCGCGCTGGCCCGCGGCGAGCTGCACGTCATCGGCGC CACCACCATCGACGAGTACCGCAAGCACATCGAGAAGGACCCGGCGCTGGAGCGCCGCTTCCAGCCGGTGCTGATCCCGG AGCCCTCGGTCGAGGAGACCGTGCAGATCCTGGAGGGCCTGCGCGACTCGTACGAGGCGCACCACCAGGTCCGCTTCACC GACGAGGCGCTGCGCGCCGCCGCCGACCTCTCCGACCGGTACGTCTCGGACCGCTTCCTGCCCGACAAGGCGATCGACCT GATCGACCAGGCCGGCGCCCGGGTCCGGCTGCGCGGCCTGGGCCGCTCCACCGAGGTGATCGGCCGCGAGGACGAGCTGG CCAAGCTGCGCCGCGAGAAGGACGAGGCGGTGGCCGCCGAGGACTTCGCCCGCGCCTCCGAGCTGAAGGGCCGGATCGCC GACCTGGAGGCGCAGGCCGCCGAGATCGAGGAGCGCCGCGAGGGCGTGGTCTCGGTGACCGTCGACGACATCGCCGACGT GCTGTCCCGGCAGACCGGCATCCCGGTCTCCCAGCTCACCGAGGACGAGAAGGCCCGGCTGCTCAAGCTGGAGGACGAGC TGCACGCCCGGGTGATCGGCCAGGACAGGGCGGTGGTCGCGGTCTCCGAGGCGGTCCGCCGCAGCCGGGCCGGGATGGCC GACCCGAACCGGCCGGTCGGCTCCTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAACTCGCCAAGGCCCTGGC CGAGTTGATCTTCGGGGACGAGGACCGGCTGGTCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACCGTCTCCCGGC TGGTCGGCGCCCCGCCCGGGTACGTCGGCTACGACGAGGCCGGCCAGCTGACCGAGGCGGTGCGCCGCCGCCCGTACAGC GTGCTGCTGTTCGACGAGGTCGAGAAGGCCCACCCGGACGTCTTCAACGCGCTGCTGCAGGTCCTCGACGACGGGCGGCT GACCGACGCGCAGGGCCGCACCGTCGACTTCCGCAACACCGTGGTCATCATGACCTCCAACATCGGCTCGCAGCTGATCC TCTCGCACAAGGGCGAGACCGAGGAGATCCGCGACCGGCTGATGGAGGAGCTGCGCGGGCGCTTCCTGCCCGAGTTCCTC AACCGGATCGACGACATCATCGTCTTCGACGCGCTGGACGCCGACGACCTGCTGCGGATCGTCGACCTGATGCTCGCCAA CTCCGAACGCCGGGTGAAGGCCCAGGGGTTGGAGCTGGAGGTCACCTCGGCCGCCAAGGACTGGCTGGTCGGCAAGGGCC ACCAGCCCGAGTTCGGCGCCCGCCCGCTGCGCCGCACCATCCAGACCCAGCTCGACAACCGGCTCGCCACCATGCTGCTC TCCGGCGACCTCCAGCCGGGCGACACCATCGTGGCGGACGCGAAGGACGGCGAGCTGGTCTGCTCGATCGGCCGCCCCGA GCCGTCCTGA Protein sequence : MTMPGFGSFGSDDAFSDLLNRFFGLNPAASPPAVQRVPIGRLLTESARDLIARAELRAQEDGSTDLDTPHLLWAATRVDP SRGLLAQAGADPDELAAALERSLPSGSADPSVDPGLTPAAKRVLIGAHARSQAAGVSYIGPEHILAALLGDPDSAAGRLL NAQGADPARLQRGAEVAARGERAPAKAESRTPTLDEYGRDLTEDAKLGRLDPVVGRAEEIEQTVEILSRRSKNNPVLIGE PGVGKTAIVEGLAQRIVTGDVPSTLKDRRVVSLDLSGLVAGSKYRGEFEERLKNVIDEVREAADSTILFIDELHTVVGAG AGGEGAMDAGNMLKPALARGELHVIGATTIDEYRKHIEKDPALERRFQPVLIPEPSVEETVQILEGLRDSYEAHHQVRFT DEALRAAADLSDRYVSDRFLPDKAIDLIDQAGARVRLRGLGRSTEVIGREDELAKLRREKDEAVAAEDFARASELKGRIA DLEAQAAEIEERREGVVSVTVDDIADVLSRQTGIPVSQLTEDEKARLLKLEDELHARVIGQDRAVVAVSEAVRRSRAGMA DPNRPVGSFLFLGPTGVGKTELAKALAELIFGDEDRLVRFDMSEFQEKHTVSRLVGAPPGYVGYDEAGQLTEAVRRRPYS VLLFDEVEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNIGSQLILSHKGETEEIRDRLMEELRGRFLPEFL NRIDDIIVFDALDADDLLRIVDLMLANSERRVKAQGLELEVTSAAKDWLVGKGHQPEFGARPLRRTIQTQLDNRLATMLL SGDLQPGDTIVADAKDGELVCSIGRPEPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-164 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC2 | YP_004907842.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 7e-171 | 51 |
| clpC2 | YP_004907842.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 6e-144 | 51 |
