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Name : clpC1 (KSE_34130) Accession : YP_004905176.1 Strain : Kitasatospora setae KM-6054 Genome accession: NC_016109 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3813415 - 3815931 bp Length : 2517 bp Strand : + Note : - DNA sequence : ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCACAGGAAGAAGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGCGAGGGTGTCGCCGCAAAGGCGCTGGAGAGCCTCGGCA TCTCGCTTGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGCCACATCCCCTTC ACCCCCCGGGCGAAGAAGGTGCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTGAAGCTCGGCGCCGACCTGAACCGGG TGCGCCAGCAGGTCATCCAGCTGCTGTCCGGCTACCAGACCACCGGCAAGGAGTCGGCCACCGCCGGCGGCCCGGCCGAG GGCACCCCCTCCACCTCCCTGGTGCTCGACCAGTTCGGCCGCAACCTGACGCAGGCCGCCCGCGAGGCCAAGCTCGACCC GGTGATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCG GCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCCCAGGCGATCGTCAAGGGCGAGGTCCCCGAGACGCTC AAGGACAAGCAGCTCTACACCCTGGACCTCGGCGCCCTGGTGGCCGGCTCGCGCTACCGCGGTGACTTCGAGGAGCGCCT GAAGAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACCCTGGTCGGCGCGG GCGCCGCCGAGGGCGCGATCGACGCCGCCTCCATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGCGCC ACCACGCTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAACCGATCCAGGTCGCCGA GCCCTCGCTCGCGCACACCATCGAGATCCTCAAGGGCCTGCGCGACCGGTACGAGGCCCACCACCGGGTCTCGATCACCG ACGCCGCCTTGGTCGCCGCCGCCACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTG ATCGACGAGGCCGGCTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGC CGACGTCCGCCGGGAGAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCGTCGCTGCGCGACAACGAGAAGC AGCTGCTCCAGGCGAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTGGCCGAGGTGGACGAGGAG CTGATCGCCGAGGTCCTGGCCACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCCCGGCTGCTGCG CATGGAGGACGAGCTGCACAAGCGGGTCATCGGCCAGGAGGACGCCATCAAGGCGCTCTCCCAGGCGATCCGCCGCACCC GGGCGGGCCTCAAGGACCCGAAGCGCCCCGGCGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGTAAGACCGAGCTG TCCAAGACCCTGGCGGAGTTCCTGTTCGGGGACGAGGACGCGCTGATCGCGCTCGACATGTCCGAGTTCTCCGAGAAGCA CACCGTCTCCCGGCTGTTCGGCTCCCCGCCCGGGTACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCC GCAAGCCGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTG GAGGACGGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACCACCAACCTCGG CACCCGGGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCACGGGTGACGTCCAGGCCGGCTACGAGCGGATGAAGG CCAAGGTCGGCGAGGAGCTCAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGCGTCGACGACATCGTGGTCTTCCACCAG CTGTCCGAGGCGAACATCATCGAGATCGTCGACCTGATGATCGCCCGGGTCGACCAGCGGATGAAGGACCGGGACATGGG CATCGAGCTCAGCCCGGAGGCCAAGAGCCTGCTGGCGAAGCGCGGCTACGACCCGATCCTGGGCGCGCGTCCGCTGCGCC GCACGATCCAGCGGGAGATCGAGGACCACCTGTCCGAGAAGATCCTGTTCGGTGAGCTGCGCTCGGGCCACATCGTGGTC GTCGGCGTGGAGGGTGAGGGCAAGGAGGCCAAGTTCACCTTCCGCGGCGAGGAGAAGTCCCCGGTGGCGGACACCCCGGC GGCGGTCACGGCGGCCGGTCCGGATCTGACCAAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQTTGKESATAGGPAE GTPSTSLVLDQFGRNLTQAAREAKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETL KDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA TTLDEYRKHLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDL IDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFEKAASLRDNEKQLLQAKAKREKEWKAGDMDVVAEVDEE LIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTEL SKTLAEFLFGDEDALIALDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL EDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAATGDVQAGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQ LSEANIIEIVDLMIARVDQRMKDRDMGIELSPEAKSLLAKRGYDPILGARPLRRTIQREIEDHLSEKILFGELRSGHIVV VGVEGEGKEAKFTFRGEEKSPVADTPAAVTAAGPDLTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 77 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-95 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_004905176.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 62 |
| clpC1 | YP_004905176.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 2e-148 | 52 |
