Gene Information

Name : KSE_30140 (KSE_30140)
Accession : YP_004904782.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3400156 - 3400842 bp
Length : 687 bp
Strand : +
Note : Similar to Transcriptional regulatory protein AfsQ1 in Streptomyces coelicolor (Q04942).

DNA sequence :
ATGACCCCCGTGTCTTTCCTGCTTCTGATCGAGGACGACGACGCCATTCGCACCGGCCTCGAACTCGCCCTCACCCGCCA
GGGTCACCGGGTGGCCGCCGCCGCGTCCGGCGAGGACGGTCTGCGCCTGTTCAAGGAGCAGCGCCCGGACCTGATCGTGC
TGGACGTGATGCTGCCCGGCATCGACGGCTTCGAGGTCTGCCGGCGGATCCGCCGCACCGACCAGTTGCCGATCATCCTG
CTGACCGCCCGCTCCGACGACATCGACGTGGTGGTCGGCCTGGAGTCCGGCGCCGACGACTACGTGGTGAAACCGGTCCA
GCCGCGCGTGCTGGACGCCCGGATCCGCGCGGTGCTGCGCCGCGGCGAACGGGAGAACTCGGACTCCTCCGCGTACGGCG
GCCTGGTGATCGACCGCTCGGCGATGACCGTCACCAAGGACGGCCAGGACCTGCAGCTGACCCCGACCGAGCTGCGGCTG
CTGCTGGAGCTCAGCCGCCGCCCGGGGCAGGCGCTCTCCCGGCAGCAGCTGCTGCGGCTGGTCTGGGAGCACGACTACCT
GGGCGACTCCCGGCTGGTGGACGCCTGCGTGCAGCGGCTGCGGGCGAAGGTCGAGGACGTGCCGTCCGCGCCGACGCTGA
TCCGCACCGTCCGGGGTGTCGGCTACCGTCTCGACCCGCCCGTCTGA

Protein sequence :
MTPVSFLLLIEDDDAIRTGLELALTRQGHRVAAAASGEDGLRLFKEQRPDLIVLDVMLPGIDGFEVCRRIRRTDQLPIIL
LTARSDDIDVVVGLESGADDYVVKPVQPRVLDARIRAVLRRGERENSDSSAYGGLVIDRSAMTVTKDGQDLQLTPTELRL
LLELSRRPGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSAPTLIRTVRGVGYRLDPPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_30140 YP_004904782.1 putative two-component system response regulator AE000516.2.gene3505. Protein 3e-34 46
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002952.2859905.p0 Protein 3e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002951.3237708.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_003923.1003749.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002758.1121668.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_009641.5332272.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_013450.8614421.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_007793.3914279.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_007622.3794472.p0 Protein 3e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002745.1124361.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_009782.5559369.p0 Protein 4e-36 43
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_012469.1.7685629. Protein 7e-38 43
KSE_30140 YP_004904782.1 putative two-component system response regulator BAC0197 Protein 1e-25 43
KSE_30140 YP_004904782.1 putative two-component system response regulator BAC0125 Protein 3e-24 42
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_012469.1.7686381. Protein 2e-32 42
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_003923.1003417.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_013450.8614146.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002951.3238224.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator AE015929.1.gene1106. Protein 1e-25 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_007793.3914065.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002758.1121390.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_010079.5776364.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_002952.2859858.p0 Protein 1e-30 41
KSE_30140 YP_004904782.1 putative two-component system response regulator NC_007622.3794948.p0 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_30140 YP_004904782.1 putative two-component system response regulator VFG1389 Protein 1e-22 42
KSE_30140 YP_004904782.1 putative two-component system response regulator VFG1390 Protein 2e-27 41
KSE_30140 YP_004904782.1 putative two-component system response regulator VFG0596 Protein 8e-24 41