Gene Information

Name : KSE_28520 (KSE_28520)
Accession : YP_004904619.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3192740 - 3193435 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACAGTGCTTGTGGTCGAGGACGACCCCTTTGTGCGTTCCGCCCTGATCCGCCATCTGGCCGACACCGGCCACGC
CGTGCGCTCCGTCGGCACCGCCCTGGAGGCCCTGCGCGAAGTCGCCCAGGTCGGCTGCGACCTGGTGGTCCTCGATCTGG
GCCTGCCCGATCTGGACGGCAGCGAGGCGCTCAAGATGATCCGCGGCCTGACCAACGTCCCGGTGATCATCTCCACCGCG
CGGGACGACGAGGCGGAGATCGTCCGGCTGCTGAACGACGGCGCCGACGACTACCTGGTGAAACCTTTCTCCGGTGAGCA
CCTCACGGCCCGGATGGCGGCCGTCCTGCGCCGACTGGGCGGCGGCGCGCTGATGGCCCCGCAGATCCTCCGGGTCGGCG
GCCTCGCCATCGACCCGCAGCGCCGCGAGGCCCTGCTGGACGGGCAGCGGCTCGACCTCACCCGACGCGAGTTCGACCTG
CTGGCCTTCCTCGCCGCCCGCCCCGGCGTGGTCGTCCCGCGCAAGGAGATCCTCGCCGAGGTGTGGCGGCAGACCTACGG
AGGGGACCAGACCATCGACGTCCACCTGTCCTGGCTGCGCCGCAAACTCGGCGAGACCGCCTCCAACCCGCGCTACCTGC
ACACCGTGCGCGGCGTCGGCGTCCGCCTGGAAGCCCCCAGCGGACCGGTCGGGTGA

Protein sequence : 
MATVLVVEDDPFVRSALIRHLADTGHAVRSVGTALEALREVAQVGCDLVVLDLGLPDLDGSEALKMIRGLTNVPVIISTA
RDDEAEIVRLLNDGADDYLVKPFSGEHLTARMAAVLRRLGGGALMAPQILRVGGLAIDPQRREALLDGQRLDLTRREFDL
LAFLAARPGVVVPRKEILAEVWRQTYGGDQTIDVHLSWLRRKLGETASNPRYLHTVRGVGVRLEAPSGPVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_28520 YP_004904619.1 putative two-component system response regulator BAC0533 Protein 1e-17 42
KSE_28520 YP_004904619.1 putative two-component system response regulator CP000647.1.gene4257. Protein 1e-17 42
KSE_28520 YP_004904619.1 putative two-component system response regulator CP001138.1.gene4273. Protein 1e-17 42
KSE_28520 YP_004904619.1 putative two-component system response regulator CP001918.1.gene5135. Protein 2e-17 41
KSE_28520 YP_004904619.1 putative two-component system response regulator CP004022.1.gene3215. Protein 7e-17 41
KSE_28520 YP_004904619.1 putative two-component system response regulator CP000034.1.gene3834. Protein 3e-17 41
KSE_28520 YP_004904619.1 putative two-component system response regulator NC_002695.1.915041.p Protein 3e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KSE_28520 YP_004904619.1 putative two-component system response regulator VFG1390 Protein 4e-25 43
KSE_28520 YP_004904619.1 putative two-component system response regulator VFG1389 Protein 1e-25 42