Gene Information

Name : rph (KSE_28170)
Accession : YP_004904584.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Unknown
Product : putative ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 3159055 - 3159780 bp
Length : 726 bp
Strand : -
Note : protein synonym:RNase PH; protein synonym:tRNA nucleotidyltransferase

DNA sequence :
ATGTCTCGCATCGACGGCCGCACCCCCGACCAGCTCCGCCCCGTCACCATCGAACGGAACTGGAGCAAGCACGCCGAAGG
CTCCGTCCTGGTCTCCTACGGCGACACCAAGGTGCTGTGCACCGCCAGCGTCACCGAAGGCGTCCCGCGCTGGCGCAAGG
GCAGCGGCGAGGGCTGGGTCACCGCCGAGTACGCCATGCTGCCCCGGGCCACCAACACCCGCGGCGACCGCGAGTCCGTC
CGCGGCAAGATCGGCGGACGTACCCACGAGATCAGCCGCCTGATCGGCCGCTCGCTGCGCGCCGTCATCGACCACCGGGC
GCTCGCCGAGAACACCATCGTGCTCGACTGCGACGTCCTCCAGGCCGACGGCGGCACCCGCACCGCCGCCATCACCGGCG
CGTACGTCGCCCTGGTCGACGCGGTCTCCTGGGCGCGCGAGAAGAAGCTGCTGCGCGCCAAGGGCCAGCCGATCACCGGC
GGTGTCAGCGCCGTCAGCGTCGGCATCATCGACGGCGTCCCGATGCTCGACCTCCGCTACGAGGAGGACGTCCGGGCCGA
GACCGACATGAACATCGTCTGCACCTCCGACGGCCGCTTCGTCGAGGTCCAGGGCACCGCCGAGGGCGCGCCCTTCGACC
GCGACCTGCTCAACCAGCTGCTCGACCTCGGCAGCCTGGGCTGCGCCGAGCTGGACGAGATCCAGCGCAAGGCGCTGGAG
GTCTAG

Protein sequence :
MSRIDGRTPDQLRPVTIERNWSKHAEGSVLVSYGDTKVLCTASVTEGVPRWRKGSGEGWVTAEYAMLPRATNTRGDRESV
RGKIGGRTHEISRLIGRSLRAVIDHRALAENTIVLDCDVLQADGGTRTAAITGAYVALVDAVSWAREKKLLRAKGQPITG
GVSAVSVGIIDGVPMLDLRYEEDVRAETDMNIVCTSDGRFVEVQGTAEGAPFDRDLLNQLLDLGSLGCAELDEIQRKALE
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-61 62