Gene Information

Name : pyk1 (KSE_20360)
Accession : YP_004903815.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2266663 - 2268090 bp
Length : 1428 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCGAGCAAAAATCGTTTGTACTCTCGGGCCCGCCGCGGATTCGTACGACCAGATCAAGGCCCTGGTCGACGCCGG
CATGGACATCGCCCGCCTGAACCTCAGCCACGGCTCCCACGCGGAGCACGAGGACCGCTACCACCGCGTCCGCAAGGCCG
CGGACGAGACCGGCCGCAGCGTCGGTGTGCTGGCCGACCTCCAGGGCCCCAAGATCCGCCTCGCCACCTTCGCCGACGGG
CCCGTCCTGCTGGAGCGCGGGGACGAGTTCACCATCACCGTCGACGACGTCCCGGGCGACCGGGAGATCTGCGGCACCAC
GTACAAGGGCCTGGCCGCGGACGTCTCGCGCGGCGAGCGGATCCTGGTCGACGACGGCCGGGTCTGCCTGGAGGTCACCC
ACGTCGAGGGCCCCCGGGTGCACTGCATCGTGATCGAGGGCGGCCTCGTCTCCGACCACAAGGGCCTCAACCTCCCCGGC
GTCGCCGTCTCGGTGCCCGCGCTCTCCGACAAGGACGTCGAAGACCTGCGCTGGGCCCTGCGGACCGGTGCCGACATCAT
CGCGCTGTCGTTCGTGCGCAGCGGGAAGGACGTCGAGGAGGTGCACCGGATCATGGCCGAGGAGGGCCGGCGGATCCCGG
TCATCGCCAAGATCGAGAAGCCGCAGGCGGTGGAGAACCTGGAGTCCATCGTGGACGCCTTCGACGGCATCATGGTCGCC
CGCGGCGACCTGGGCGTCGAACTCCCGCTGGAGCAGGTGCCGATCGTCCAGAAGCGGGCGGTCAAGCTGGCCAAGCGCAA
CGCCAAGCCGGTGATCGTCGCGACCCAGATGCTGGACTCGATGATCAACGCCTCCCGGCCCACCCGGGCCGAGGCGTCCG
ACGTCGCCAACGCGGTGCTGGACGGCACCGACGCGGTGATGCTCTCCGGCGAGACCTCGGTCGGCAAGTACCCGGTCGAG
ACCGTCAAGACCATGGCCCGGATCGTCGAGGCCGCCGAGGAGGAGATCCTCGCCGGCGGCCTGCCCGAACTCACCGCCAA
CAGCAAGCCCCGCACCCAGGGCGGCGCGGTGGCCCGGGCCGCCGCCGAGATCGGCGACTTCCTGGACGCCAAGTACCTGA
TCGCGTTCACCCAGAGCGGCGACACCGCCCGCCGGCTGACCCGCTACCGCTCCCCGATCCCGGTCCTCGCCTTCACCTAC
GAGCCCGCCGTCCGCAGCCAGTTGGCCCTCACCTGGGGCGTGGAGACCTTCCTCGGCCCGTTCGTCACCACCACCGACGA
ACTCGTCGCCCAGGTCGACTCCGCCCTGCTCAGCCTCGGCCGCTGCAAGCGCGGCGACATCGTGATCATCACCGCCGGCT
CCCCGCCCGGCCTGGCCGGCTCCACCAACCTGGTGCGGGTCCACCACATCGGCGAACTCGACAACTGA

Protein sequence :
MRRAKIVCTLGPAADSYDQIKALVDAGMDIARLNLSHGSHAEHEDRYHRVRKAADETGRSVGVLADLQGPKIRLATFADG
PVLLERGDEFTITVDDVPGDREICGTTYKGLAADVSRGERILVDDGRVCLEVTHVEGPRVHCIVIEGGLVSDHKGLNLPG
VAVSVPALSDKDVEDLRWALRTGADIIALSFVRSGKDVEEVHRIMAEEGRRIPVIAKIEKPQAVENLESIVDAFDGIMVA
RGDLGVELPLEQVPIVQKRAVKLAKRNAKPVIVATQMLDSMINASRPTRAEASDVANAVLDGTDAVMLSGETSVGKYPVE
TVKTMARIVEAAEEEILAGGLPELTANSKPRTQGGAVARAAAEIGDFLDAKYLIAFTQSGDTARRLTRYRSPIPVLAFTY
EPAVRSQLALTWGVETFLGPFVTTTDELVAQVDSALLSLGRCKRGDIVIITAGSPPGLAGSTNLVRVHHIGELDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-77 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-78 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-78 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-77 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk1 YP_004903815.1 putative pyruvate kinase VFG0479 Protein 4e-78 42