Gene Information

Name : KSE_12650 (KSE_12650)
Accession : YP_004903054.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 1403745 - 1404761 bp
Length : 1017 bp
Strand : +
Note : -

DNA sequence :
ATGACCAATCGCAAGCTCTCCGCCGCCGTGCTCGCCACGCTGCTCTCCACCGCCCTGCTGACCGCCTGCGGCAGCGGGGG
CTCCGCCGCCGACGCCAAGGGCGCCGGCTCCCAGCCCGCCGCCGGCCAGGCCGCCGGCGGGGACAGCGCCGCCGCGTTCC
CGCGCGGCGTCAAGCACGCGCTGGGCACCGCCGAGATCAAGTCCCAGCCCAAGCGGGTCGTGGTGCTGGACTCCGGCGAG
CTGGACGACGTCACCCTGCTCGGCATCACCCCGGTCGGCGCGGTCGCCCCGCACCTGAAGACCGAGGGCGGCTTCCCCGC
GTACCTCGCGGGCAAGGTCGACGGCACCAAGGACGTCGGCCCGATGAACGAGCCGAACCTCGAACTGATCGCCTCGCTCA
AGCCGGACCTGATCCTCACCTCGAAGGTCCGCCACGAGAAGGTGTACGACAAGCTCAACGCGATCGCCCCGACCGTGATG
GCCGAGACCACCGGCGAGCCGTGGAAGGCCAACCTCAAGCTGTACGCGCAGGCCCTCGGCAAGGAGACCGAGGCCGCGAA
GGCGCTGGCCGACTACGAGGCGCGCGCCGCCAAGCTCGGCGCGGAGATCAAGGCCAAGTACAACGGCACCGCACCGACCG
TCTCGGTGGTCCGCTTCGTGGCCGGCCCGACCCGCCTCTACCAGAACGCCTCGTTCAGCGGCGTGGTGCTCAAGGACGTC
GGCCTGGCCCGCGCGGTCAAGGCCCCGGACGTCGACAAGTCGATGCTCGACGTCAGCCCCGAGCAGATCAACCAGGCCGA
CGCCGACCTGGTGTTCGTCACCACCTCCGACGACCCGTCCAAGACCAAGCAGGCCGAGGTCCAGCAGACCGCCGTCTGGC
AGGGCCTGAACGCGGTCAAGAACGGCAAGGTCTTCACCGTCCCGGACGAGACCTGGATGTCCGGCATCGGCGTCCAGGCC
GCCGACCGGATGCTCGGCGACATCGCCAAGGCGGCCGGCGTCGACGCGCCCAAGTAG

Protein sequence :
MTNRKLSAAVLATLLSTALLTACGSGGSAADAKGAGSQPAAGQAAGGDSAAAFPRGVKHALGTAEIKSQPKRVVVLDSGE
LDDVTLLGITPVGAVAPHLKTEGGFPAYLAGKVDGTKDVGPMNEPNLELIASLKPDLILTSKVRHEKVYDKLNAIAPTVM
AETTGEPWKANLKLYAQALGKETEAAKALADYEARAAKLGAEIKAKYNGTAPTVSVVRFVAGPTRLYQNASFSGVVLKDV
GLARAVKAPDVDKSMLDVSPEQINQADADLVFVTTSDDPSKTKQAEVQQTAVWQGLNAVKNGKVFTVPDETWMSGIGVQA
ADRMLGDIAKAAGVDAPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 2e-54 47
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 2e-54 47
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 2e-54 47
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 2e-54 47