Gene Information

Name : fepD1 (KSE_12620)
Accession : YP_004903051.1
Strain : Kitasatospora setae KM-6054
Genome accession: NC_016109
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1400685 - 1401701 bp
Length : 1017 bp
Strand : +
Note : -

DNA sequence :
GTGTCCACCGCTCCGGCGCTCCGGCCCGTGCTCCTGCGGCAGTCCCTGCTGCTCGCCGCCGGTCTCGGGGCGCTCGCGCT
GTGCGCGGCCCTCAGCCTCGTCCTCGGCTCGCGGTCGATCCCGCTCCCGGCCGTGCTCGACGCCCTGTCAGGTCGGGCGC
ACGGCCCGGACGCTGACGTGGTGCTCGGCCTGCGGGTGCCGCGCACCGTCATCGGGATCGCGGTGGGCGCGGCGCTCGGC
GCGGCCGGGGCGGTCGCCCAGGGGGTGACCCGCAACCCGCTGGCGTCGCCGACCACGCTCGGCATCAACGCGGGCGCCGG
GTTCGCCGTGGTGACCGCGGTCTTCGCGCTGGGCCTGTCGCACCCGCTGCAGTACGTCTGGTTCGCGGTGGCGGGCGCGA
CCGGCGCCGCGCTGCTGGTCTACGGGATGGCGCGCCGCTCGGGCGACCTGGACCCGGTGCGCCTGGCGCTCGGCGGGACG
GTGCTGTCGGCGGTGCTGGCGTCCTGGACGTCGGCGCTGATGCTGGCGAGCCGGCGCACCCTGGACGAGGCCCGGTTCTG
GCTGGCCGGTTCGATCGGCGGCCGGAGCCTGGACGGGCTGTACCAGGTGCTGCCGCTGCTCGCGGTCGGGGTGGTGCTGG
CGCTGCTGATCGCCCCGGCGCTGAACGCGCTGGCGCTCGGCGACGAGACCGCGCAGGCGCTGGGCGTGCCGGTGGCCCGG
ATCAGGGTGGCGGGCGGCCTGGCCGTGGTGCTGCTGGCGGCCGGCTCGGTCGCGGTCGCCGGGCCGGTGGCGTTCATCGG
ACTGGCGGCGCCGCACCTGGTGCGTCCGCTGCTGGGCAACGACCACCGGGTGCTGGTGCCGGGCTGCCTGATCGCCGGCC
CGGTGCTGCTCCTGCTGGCCGACGTCCTGGGCCGGCTGGTGCTGCGCCCGTCCGAGATCGAGGTCGGGATCGTCACCGCG
TTCCTCGGCGCGCCACTGCTCGCGGTGCTGGCCCGGAAGGCGGCGGCGGCCCGATGA

Protein sequence :
MSTAPALRPVLLRQSLLLAAGLGALALCAALSLVLGSRSIPLPAVLDALSGRAHGPDADVVLGLRVPRTVIGIAVGAALG
AAGAVAQGVTRNPLASPTTLGINAGAGFAVVTAVFALGLSHPLQYVWFAVAGATGAALLVYGMARRSGDLDPVRLALGGT
VLSAVLASWTSALMLASRRTLDEARFWLAGSIGGRSLDGLYQVLPLLAVGVVLALLIAPALNALALGDETAQALGVPVAR
IRVAGGLAVVLLAAGSVAVAGPVAFIGLAAPHLVRPLLGNDHRVLVPGCLIAGPVLLLLADVLGRLVLRPSEIEVGIVTA
FLGAPLLAVLARKAAAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-06 43
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-06 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-06 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-06 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD1 YP_004903051.1 putative iron-siderophore ABC transporter permease protein VFG0926 Protein 2e-13 43