Gene Information

Name : KKY_836 (KKY_836)
Accession : YP_004898625.1
Strain : Pelagibacterium halotolerans B2
Genome accession: NC_016078
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, large permease component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 801793 - 803082 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence :
ATGACACTGGGCTTTATCGTCATCGGCGGCTTCATCGCCATGATGCTCGTCGGCGTTCCGGTTACCATGGCCATCGCCAT
GGGATCGATCTTCGGCCTGTACTGGGCGGGGTTCGGCGACAACGCAATCGTCGTTCCCCAGCAGGTTCTGGATGGAGCGG
GCAAGCCTGCGCTGCTGGCCATTCCCTTCTTCATTCTCGCCGGGAACCTCATGAATGCAATCGGGCTAACCGATCGCATC
TTCAATTTCGCACTTTCGATCGTTGGTCATTTTCGGGCCGGCCTGGCCTATGTGAACGTGCTTGCCTCGCTGCTTTTCGC
TGGCGTTTCAGGCGCGGCCACCGCCGATATCGCAGGGCTGGGCCAGCTCGAAGTCAAGGCCATGCGCAAGAGGGGCTATA
ATCCCGAATTCGCTGCCGCACTTACCGTTGCGACCTCGCTTGTCGGCCCGATCATTCCCCCTTCGATCAGCCTGATCGTC
TATGCGTGGCTTGCAAACGAGTCCGTGTCACGGCTGTTTCTCGCAGGGATCATCCCGGGCATCCTCGTTGCAATTTCCTT
TATCGCCTATATCCGGATCATTTCGATCTGGACGCCCATGCCGCGTGAAGAAAAGGTGGGGCTGGCGGGAATTGGCAAGG
CCACGCTCGAGGGCCTGCCCGCTCTGGTTGCCCCCGGCATCATCCTGGGCGCCATCATTTTCGGTTTTGCCACCGCCACC
GAGGCCGGCGTCATTGCCTGCGCCTATTCCATCCTGATCGGTCTCTTCTACAAGTCCCTGACGTGGAAGGCTTTGTGGCA
CGCGCTGACGGAAAGCGCCGTCCTTTCGTCTCTCATCATGATGATTATCGGGTTTTCCCAGATCATGGGCTGGCTGTTCG
CGTTCGAGCAGGTCCCGCAGGCGTTTGCGTCCGGTATTCTCGAAACGATCGACTCGCGCGCCGTGTTTATGGTGTTCGTC
ATCATCCTGCTGGTGGTGATCGGATGTTTCATGGAGGCTTCGCCGGCAAAGATCATCCTGCTCCCGCTTCTTTTGCCGGT
GGCCGATGCCTTTGGCGTCGATCGCGTGCAGTTTGGCATGGTCATCACGCTTGCCCTGCTTTTGGGGATTGCAACGCCTC
CTCTCGGCGTTGGGCTTTATCTGATGTCGGCGGTATCGGGCGTTCGCTTTGAGAAGCTGGCGATCGCCATATTGCCTTTG
ATGATCCCGCCCATCGTCGTTCTGATCCTGATCGCGGCGATCCCCGAAATTACGCTCTGGCTGCCCGATCTGGTGCTGGG
GCCGCGCTGA

Protein sequence :
MTLGFIVIGGFIAMMLVGVPVTMAIAMGSIFGLYWAGFGDNAIVVPQQVLDGAGKPALLAIPFFILAGNLMNAIGLTDRI
FNFALSIVGHFRAGLAYVNVLASLLFAGVSGAATADIAGLGQLEVKAMRKRGYNPEFAAALTVATSLVGPIIPPSISLIV
YAWLANESVSRLFLAGIIPGILVAISFIAYIRIISIWTPMPREEKVGLAGIGKATLEGLPALVAPGIILGAIIFGFATAT
EAGVIACAYSILIGLFYKSLTWKALWHALTESAVLSSLIMMIIGFSQIMGWLFAFEQVPQAFASGILETIDSRAVFMVFV
IILLVVIGCFMEASPAKIILLPLLLPVADAFGVDRVQFGMVITLALLLGIATPPLGVGLYLMSAVSGVRFEKLAIAILPL
MIPPIVVLILIAAIPEITLWLPDLVLGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 4e-46 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 4e-46 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KKY_836 YP_004898625.1 TRAP-type C4-dicarboxylate transport system, large permease component VFG1110 Protein 2e-46 41