Gene Information

Name : KKY_3541 (KKY_3541)
Accession : YP_004901276.1
Strain : Pelagibacterium halotolerans B2
Genome accession: NC_016078
Putative virulence/resistance : Virulence
Product : urease alpha subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : -
Position : 3506210 - 3507922 bp
Length : 1713 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGCAAAAATTTCCCGCGCGCTTTACGCAGACATGTACGGTCCCACCACAGGAGATCGGGTGCGGCTGGCCGATAC
CGAGTTGTTCATCGAAGTGGAAAAAGACTTCACCGTCTATGGCGAAGAGGTCAAATTCGGCGGCGGCAAGGTGATCCGGG
ACGGCATGGGGCAATCGCAGGTTACCCGCGCCGCAGGCGCGGTTGACACGGTGATCACCAACGCACTTATCGTCGATCAC
ACGGGAATTTACAAAGCCGATATCGGCCTCAAGGACGGCGTGATCGCTGCCATTGGCAAGGCGGGAAATCCCGATACCCA
ACCGGGCGTCAACATCATCGTGGGACCGGGCACTGAGGCGATTGCTGCCGAGGGCAAGATCGTGACCGCCGGCGGATTCG
ACGCCCATATTCATTTTATCTGCCCCCAGCAGATCGAGGAGGCTCTGACGTCAGGACTGACCACAATGCTGGGTGGGGGC
ACCGGACCAGCGCATGGAACGCTGGCGACAACATGCACGCCCGGCGCCTGGCATCTGGGCCGAATGATCCAGTCATTTGA
CGCCTTTCCCATGAACATCGCGCTCGCGGGCAAGGGCAATGCCTCAAAGCCCGAAGCGCTTGTCGAAATGATCATGGGTG
GCGCCGCCGCTCTCAAGCTGCATGAGGACTGGGGAACGACGCCCGCCGCCATCGACAATTGTCTTTCGGTTGCCGATGCC
TATGACGTGCAGGTGATGATCCACACCGACACGCTCAATGAATCGGGCTTTGTGGAAGACACGATAAACGCCTTCAAGGG
ACGGACCATCCACGCATTCCACACCGAAGGTGCCGGCGGCGGGCACGCACCCGACATCATCAAGGTGTGCGGGCTGGAAA
ACGTCATCCCGTCCTCGACCAATCCGACCCGTCCCTATACGCGCAACACGTTGGCCGAGCATCTCGACATGCTCATGGTC
TGCCACCATCTCGACCCTTCGATTGCCGAAGACGTGGCGTTTGCTGAAAGTCGCATCCGCAAGGAAACAATCGCTGCCGA
GGATATCCTGCACGACATCGGCGCCTTTTCGATCATTTCCTCGGACAGCCAGGCCATGGGCCGGGTGGGCGAAGTTATCA
TCCGCACCTGGCAGACCGCCGACAAGATGAAGCGCCAGCGCGGCGCCCTGCCCGAGGAGGCAGGCGACAACGACAATTTC
CGGGTCAAGCGCTATATCGCCAAATATACGATCAATCCGGCTATAGCGCATGGCATTTCAACCCATATCGGATCGATAGA
AATCGGCAAGCGGGCCGACATAGTCGTCTGGAACCCCGCCTTTTTCGGCGTAAAGCCGGAACTGGTGCTTATGGGTGGAA
TGATCGCCACCGCTCCAATGGGCGACCCCAATGCGTCAATTCCGTCTCCCCAGCCGATGCACTATCGCCCCATGTTCGGC
GCATATGGCAAGGCGATCGCCAACACTTCGGTGACCTTTGTCTCCAAGGCGGCATTTGAAAGCGGGCTCAAGGGCAAACT
GGGCGTCGATAAATCTATGCTTGCGGTCGACAACACCAGGGGCGGCATCGGCAAATCCGCAATGATCCACAACAGCGCGA
CGCCCGAGGTTACCGTCGATCCGGAAACCTACGAGGTCCGGGCAGACGGCGAATTGCTGACCTGTGAGCCTGCCGACGTG
CTGCCGATGGCGCAGCGCTACTTCCTGTTCTGA

Protein sequence :
MAAKISRALYADMYGPTTGDRVRLADTELFIEVEKDFTVYGEEVKFGGGKVIRDGMGQSQVTRAAGAVDTVITNALIVDH
TGIYKADIGLKDGVIAAIGKAGNPDTQPGVNIIVGPGTEAIAAEGKIVTAGGFDAHIHFICPQQIEEALTSGLTTMLGGG
TGPAHGTLATTCTPGAWHLGRMIQSFDAFPMNIALAGKGNASKPEALVEMIMGGAAALKLHEDWGTTPAAIDNCLSVADA
YDVQVMIHTDTLNESGFVEDTINAFKGRTIHAFHTEGAGGGHAPDIIKVCGLENVIPSSTNPTRPYTRNTLAEHLDMLMV
CHHLDPSIAEDVAFAESRIRKETIAAEDILHDIGAFSIISSDSQAMGRVGEVIIRTWQTADKMKRQRGALPEEAGDNDNF
RVKRYIAKYTINPAIAHGISTHIGSIEIGKRADIVVWNPAFFGVKPELVLMGGMIATAPMGDPNASIPSPQPMHYRPMFG
AYGKAIANTSVTFVSKAAFESGLKGKLGVDKSMLAVDNTRGGIGKSAMIHNSATPEVTVDPETYEVRADGELLTCEPADV
LPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 8e-180 69
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 8e-180 69
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-165 63
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 9e-166 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-166 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-166 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KKY_3541 YP_004901276.1 urease alpha subunit VFG0270 Protein 2e-159 63