Gene Information

Name : KKY_1784 (KKY_1784)
Accession : YP_004899546.1
Strain : Pelagibacterium halotolerans B2
Genome accession: NC_016078
Putative virulence/resistance : Resistance
Product : tetracycline resistance protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 1769104 - 1770471 bp
Length : 1368 bp
Strand : +
Note : -

DNA sequence :
ATGCGCGTTAATCCCCAATCGAAGCTGACGCTGGTCTTCATTCTCATGACGGTGTTTCTCGACATCGTCGGGCTCGGGAT
CATCCTGCCGGTGCTTCCCGGGTTGATCGTCGAGTTGTCCCACGAAGGGATTACCGACGCTGCCAAGATCGGCGGTTATC
TGATCTTCGTCTATGCCTCGATGCAGTTTATCTTCTCGCCAATCCTGGGCAATCTGTCCGACCGATGGGGACGCCGCCCG
ATCCTGCTGCTCTCGCTGGTCGGGCTGTCGCTCGATTATCTCATCATGGCCTGGGCGCCCACTTTGCTCTGGCTTTTCGT
GGGCCGGGTCCTCTCAGGGATCTGCGGCGCGGCAATGGGCACGGCAACGGCCTATGTCGCCGACATCACGCCCAAGGAAA
AGCGCTCGCAGCGGTTCGGTCTGATCGGCGCGGCCTTCGGGCTCGGCTTTATCGTCGGCCCGGTGATCGGCGGCGAGCTG
GGCGAATTCGGGCCCCGCGCGCCCTTCTATCTGGCCTCGGCGCTGGCCGCCGCCAATGTGGTGTTCGGCTTTTTCGTCCT
GCCCGAAAGCCTCTCGAAATTCCGGCGCCGCCGGTTCAACTGGAAACGCGCCAATCCGTTCGGCGCGCTTTGGGCCTTCC
GGCATACCCCGGTGATCTTCGTCCTGCTCGGCTGCGTTTTCCTGTTTTCGCTGGCCGGACAGACCTATCCCAATGTCTGG
AACTTCTTCACGATTGAGGAATTCGGCTGGGGGCCGTCCCAGGTCGGCCGGTCGCTGGCCATCTTCGGCATCCTTTTCGC
GCTGAGCCAAGCGCTTCTGGTCGGATTTTCCACGCGCTATCTCGGCGTCACGGCGACGGTTATCATCGGGCTTTCACTGG
CCGTCATTGCGTTTATCGGTGTCTCGATGATCCACACGGAGTTGGGGCTGTGGACCTTCCTGGTCGTCGGGGCCTTTTCC
GGCATCGCGGCGCCCGCCCTCACCGGGCTTCTTGCCAACAACACACGCGCCAATCAGCAAGGCGAACTTCAGGGCGCCGT
CAACGCCTCAAATTCCCTGACGGCAATCATAGCGCCTCTGGCGGCAACGCAGATGTTTTCGTTTTTCACCACAAATGCGC
TGCGCCCCATCACCTTTCCCGGCGCACCGTTCTTTGCGGCCGGGATTATCGTTGCGGGGGCCATGGCGCTCTTTATCTAC
GCTTCCATCAGATACGACCTTTCGCACCGCCCCTATGACGAGGCGCGCGAAAAGCCGCGCTATCCCCAGCCGAGCGGCCA
GGCCGTCAATCCGCCGGAGACCGAATTGCCCGAAGATGAGGACGGAAATGGCGAGGGCGAGCCCGCGACGCAGCCCGCAA
ACAAATAA

Protein sequence :
MRVNPQSKLTLVFILMTVFLDIVGLGIILPVLPGLIVELSHEGITDAAKIGGYLIFVYASMQFIFSPILGNLSDRWGRRP
ILLLSLVGLSLDYLIMAWAPTLLWLFVGRVLSGICGAAMGTATAYVADITPKEKRSQRFGLIGAAFGLGFIVGPVIGGEL
GEFGPRAPFYLASALAAANVVFGFFVLPESLSKFRRRRFNWKRANPFGALWAFRHTPVIFVLLGCVFLFSLAGQTYPNVW
NFFTIEEFGWGPSQVGRSLAIFGILFALSQALLVGFSTRYLGVTATVIIGLSLAVIAFIGVSMIHTELGLWTFLVVGAFS
GIAAPALTGLLANNTRANQQGELQGAVNASNSLTAIIAPLAATQMFSFFTTNALRPITFPGAPFFAAGIIVAGAMALFIY
ASIRYDLSHRPYDEAREKPRYPQPSGQAVNPPETELPEDEDGNGEGEPATQPANK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 2e-31 41
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 2e-31 41
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 3e-31 41
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 2e-31 41
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 4e-32 41
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KKY_1784 YP_004899546.1 tetracycline resistance protein AY264780.2.gene3.p01 Protein 7e-42 44
KKY_1784 YP_004899546.1 tetracycline resistance protein AF090987.gene.p01 Protein 2e-36 42
KKY_1784 YP_004899546.1 tetracycline resistance protein X75761.gene.p01 Protein 9e-32 41
KKY_1784 YP_004899546.1 tetracycline resistance protein CP001485.1.gene2821. Protein 2e-32 41
KKY_1784 YP_004899546.1 tetracycline resistance protein AF534183.gene.p01 Protein 2e-32 41
KKY_1784 YP_004899546.1 tetracycline resistance protein NC_010410.6002597.p0 Protein 2e-32 41