|
Name : KKY_1097 (KKY_1097) Accession : YP_004898880.1 Strain : Pelagibacterium halotolerans B2 Genome accession: NC_016078 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1073240 - 1073719 bp Length : 480 bp Strand : + Note : - DNA sequence : ATGGCACCGAAGAAGGAAAAAGGTCTGCTCGAAACCGGCATGGTGGCCGAAAACCGCCGGGCCCGGTTCGATTATGAGGT TCTCGACACAATCGAGGCCGGCATCGTGCTGCGCGGCACCGAGGTGAAATCGCTGCGCAACGGCAAGGCCCAGATCGCCG AATCCTATGTGTCGCCCGAAGATGGGGAGCTTTGGCTCATCAATGCCAATATCCCCGAATATGTGCAGGCCAACCGCTTC AACCACGACGAAAAGCGCCGCCGCAAGCTGCTGGTCTCGCATCGCGAGCTCGACAAACTCGCCAAGGGCGTCGAGCGGCA GGGCAACACCATCGTGCCGCTCAAACTCTATTTCAACGAGCGCGGCATGGCCAAGTTGCTGATCGGGCTCGCCAAGGGGC GCAAATCCCACGACAAGCGCGACGTCCAGAAAGATCGCGACTGGGCGCGCGACAAGCAGCGGATATTGAAGCAGGGGTAA Protein sequence : MAPKKEKGLLETGMVAENRRARFDYEVLDTIEAGIVLRGTEVKSLRNGKAQIAESYVSPEDGELWLINANIPEYVQANRF NHDEKRRRKLLVSHRELDKLAKGVERQGNTIVPLKLYFNERGMAKLLIGLAKGRKSHDKRDVQKDRDWARDKQRILKQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-27 | 50 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 6e-25 | 47 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-22 | 44 |
