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Name : kdsB (Acin_0628) Accession : YP_004896007.1 Strain : Acidaminococcus intestini RyC-MR95 Genome accession: NC_016077 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 638248 - 639012 bp Length : 765 bp Strand : + Note : COG1212 DNA sequence : GTGATTCCGGCGCGTTATGCTTCTACCCGTCTGCCGGGGAAACCTCTTGCAAATCTGGCCGGTAAGCCCATGATTCAGCG TGTCTACGAACGGGCAGCCCAAGCCAAGATTCCTGATGAGATCATTGTTGCTACCGATGATGAACGCATCAAGGAAACCG TGGAAGGCTTTGGCGGCAAGGCCATGATGACGGCGGCTACGCACCCGTCCGGTACGGACCGTCTTGCTGAGGTCGCCTTG AGCTATGATAAGGTCGATGTCATCATCAATGTCCAAGGGGATGAACCGATGATTCCGCCAGAACTGATTGATTCCCTCTG TGAAGCTTTCGAAAATAACGACCAGCTCCAGATGGCGACGGCAAAGACCCTTATGGATGCGTCAGAATATGACGATCCCA ACGCGGTCAAAGTGGTTACGGACCAAAGTGGTTATGCCATCTATTTCTCTCGCAGCTTGATTCCGTATCCCCGTCACAAG ACACCGGAGTTCAAAGTATATAAGCATATTGGTATCTATGCATACCGTCGTGACTTTCTATTGAAGTTTGCGGCACTGCT TCCCACGCCTCTTGAACAGATTGAAGGTCTGGAACAGCTACGTGCCCTGGAAACGGGAGCCAAGATCAAGGTTCTCACGA CGGATTTCAAAGGCATTGGCATTGATACGCAGGAAGATCTGGATCGGGCCAACAAGGTCTTTGAACTGGAAGAAGAAAAG AAACGTCAGGAAGAAGCGGCACGAGCTGCCGAGGAAGGAAAGTAA Protein sequence : MIPARYASTRLPGKPLANLAGKPMIQRVYERAAQAKIPDEIIVATDDERIKETVEGFGGKAMMTAATHPSGTDRLAEVAL SYDKVDVIINVQGDEPMIPPELIDSLCEAFENNDQLQMATAKTLMDASEYDDPNAVKVVTDQSGYAIYFSRSLIPYPRHK TPEFKVYKHIGIYAYRRDFLLKFAALLPTPLEQIEGLEQLRALETGAKIKVLTTDFKGIGIDTQEDLDRANKVFELEEEK KRQEEAARAAEEGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-45 | 49 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-45 | 49 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-45 | 48 |
